Pathogen.env.1.0

strain	FDA1199681-S045-005
collection date	2024-11-24
Interagency Food Safety Analytics Collaboration (IFSAC) category	environmental-farm
source type	environmental
collected by	Human Foods Program \| San Francisco Human and Animal Food Laboratory (SANLHAF)
project name	GenomeTrakr
geographic location	USA:CA
isolate name alias	CFSAN140708
latitude and longitude	missing
isolation source	farm environmental swab sponge
sequenced by	Human Foods Program \| Human Foods Program \| San Francisco Human and Animal Food Laboratory (SANLHAF)
local-scale environmental context	farm [ENVO:00000078]
ontological term	environmental swab specimen:OBI:0002613 \| farm:ENVO_00000078
FDA_Lab_Id	1199681-S045-005

Supplemental Content

Pathogen.env.1.0
Pathogen.env.1.0

biosample
Escherichia coli strain FDA1199681-S045-005, whole genome shotgun sequencing pro...
Escherichia coli strain FDA1199681-S045-005, whole genome shotgun sequencing project
gi|2906124716|gb|ABXPTA000000000.1| A010000000

Nucleotide
Escherichia coli strain FDA1199682-S001-010, whole genome shotgun sequencing pro...
Escherichia coli strain FDA1199682-S001-010, whole genome shotgun sequencing project
gi|2906124718|gb|ABXPTC000000000.1| C010000000

Nucleotide
Escherichia coli strain FDA1199681-S045-001, whole genome shotgun sequencing pro...
Escherichia coli strain FDA1199681-S045-001, whole genome shotgun sequencing project
gi|2906124719|gb|ABXPTB000000000.1| B010000000

Nucleotide
Escherichia coli strain FDA1200106-S015-002, whole genome shotgun sequencing pro...
Escherichia coli strain FDA1200106-S015-002, whole genome shotgun sequencing project
gi|2852244053|gb|ABWJQV000000000.1| V010000000

Nucleotide

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