Pathogen: environmental/food/other sample from Esc... - BioSample - NCBI

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Pathogen: environmental/food/other sample from Escherichia coli O79:H40

Identifiers: BioSample: SAMN08611199; SRA: SRS3008488; CFSAN: CFSAN049857

Organism: Escherichia coli O79:H40
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli

Package: Pathogen: environmental/food/other; version 1.0

Attributes

isolate name alias	CFSAN049857,C-B-20-2-1-M-2
strain	MOD1-EC5611
Interagency Food Safety Analytics Collaboration (IFSAC) category	veterinary clinical/research\| chicken
source type	animal
collection date	1979-08-07
geographic location	USA
latitude and longitude	missing
collected by	Pennsylvania State University\| Escherichia coli Reference Center
isolation source	chicken feces
food product origin geographic location	USA:CO
host	Gallus gallus
project name	GenomeTrakr
sequenced by	Pennsylvania State University\| Escherichia coli Reference Center
attribute_package	environmental/food/other
ontological term	chicken:FOODON_03411457, feces:UBERON_0001988, gallus gallus:NCBITAXON_9031
PublicAccession	CFSAN049857
ProjectAccession	PRJNA230969
Species	coli
Genus	Escherichia

BioProject: PRJNA230969 Escherichia
Retrieve all samples from this project

Submission: CFSAN, Edward Dudley; 2018-02-26

Accession:: SAMN08611199
ID:: 8611199

BioProject SRA Nucleotide

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Pathogen: environmental/food/other sample from Escherichia coli O79:H40
Pathogen: environmental/food/other sample from Escherichia coli O79:H40

biosample
Escherichia coli O79:H40 strain MOD1-EC5611, whole genome shotgun sequencing pro...
Escherichia coli O79:H40 strain MOD1-EC5611, whole genome shotgun sequencing project
gi|1840527654|gb|AATPMQ000000000.1| Q010000000

Nucleotide
Pathogen: environmental/food/other sample from Escherichia coli O150
Pathogen: environmental/food/other sample from Escherichia coli O150

biosample
Escherichia coli O150 strain MOD1-EC5237, whole genome shotgun sequencing projec...
Escherichia coli O150 strain MOD1-EC5237, whole genome shotgun sequencing project
gi|1840527633|gb|AATPND000000000.1| D010000000

Nucleotide
Pathogen: environmental/food/other sample from Escherichia coli O8:H21
Pathogen: environmental/food/other sample from Escherichia coli O8:H21

biosample

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