Pathogen: environmental/food/other sample from Esc... - BioSample - NCBI

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Pathogen: environmental/food/other sample from Escherichia coli O39:H4

Identifiers: BioSample: SAMN08397033; SRA: SRS2868709; CFSAN: CFSAN049661

Organism: Escherichia coli O39:H4
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli

Package: Pathogen: environmental/food/other; version 1.0

Attributes

isolate name alias	CFSAN049661,07003336
strain	MOD1-EC5415
Interagency Food Safety Analytics Collaboration (IFSAC) category	veterinary clinical/research\| other animal
source type	animal
collection date	2007-03-01
geographic location	USA
host	Coryphaena hippurus
latitude and longitude	missing
collected by	Pennsylvania State University\| Escherichia coli Reference Center
host disease	missing
isolation source	feces dolphin
food product origin geographic location	USA:MD
project name	GenomeTrakr
sequenced by	Pennsylvania State University\| Escherichia coli Reference Center
attribute_package	environmental/food/other
ontological term	coryphaena hippurus:NCBITAXON_34814, dolphin family:FOODON_03413363, feces:UBERON_0001988
PublicAccession	CFSAN049661
ProjectAccession	PRJNA230969
Species	coli
Genus	Escherichia

BioProject: PRJNA230969 Escherichia
Retrieve all samples from this project

Submission: FDA Center for Food Safety and Applied Nutrition, Edward Dudley; 2018-01-25

Accession:: SAMN08397033
ID:: 8397033

BioProject SRA Nucleotide

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Pathogen: environmental/food/other sample from Escherichia coli O39:H4
Pathogen: environmental/food/other sample from Escherichia coli O39:H4

biosample
Escherichia coli O39:H4 strain MOD1-EC5415, whole genome shotgun sequencing proj...
Escherichia coli O39:H4 strain MOD1-EC5415, whole genome shotgun sequencing project
gi|1829650029|gb|AASCBX000000000.1| X010000000

Nucleotide
Pathogen: environmental/food/other sample from Escherichia coli O8:H49
Pathogen: environmental/food/other sample from Escherichia coli O8:H49

biosample
Escherichia coli O8:H49 strain MOD1-EC5413, whole genome shotgun sequencing proj...
Escherichia coli O8:H49 strain MOD1-EC5413, whole genome shotgun sequencing project
gi|1829650035|gb|AASCBY000000000.1| Y010000000

Nucleotide
Pathogen: environmental/food/other sample from Escherichia coli O14
Pathogen: environmental/food/other sample from Escherichia coli O14

biosample

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