Pathogen: environmental/food/other sample from Sal... - BioSample

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Organism: Salmonella enterica subsp. enterica
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica

Attributes

serovar	IIIa 18:z4,z23:-
strain	NY-32450
isolation source	ground turkey
source type	food
Interagency Food Safety Analytics Collaboration (IFSAC) category	turkey
collection date	2003
geographic location	USA:NY
latitude and longitude	missing
collected by	United States Food and Drug Administration
NARMS isolate number	CVM 32450
sub species	enterica
food product origin geographic location	not provided
project name	GenomeTrakr; NARMS Retail Meat
sequenced by	New York State Department of Health
ontological term	turkey (ground or minced):FOODON_00002714
attribute_package	environmental/food/other

BioProject: PRJNA183850 Salmonella enterica
Retrieve all samples from this project

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Testing standard
amikacin	susceptible	==	1	mg/L	MIC	CLSI
amoxicillin-clavulanic acid	susceptible	<=	1/0.5	mg/L	MIC	CLSI
ampicillin	susceptible	<=	1	mg/L	MIC	CLSI
cefoxitin	susceptible	==	2	mg/L	MIC	CLSI
ceftiofur	susceptible	==	0.5	mg/L	MIC	CLSI
ceftriaxone	susceptible	<=	0.25	mg/L	MIC	CLSI
chloramphenicol	susceptible	==	4	mg/L	MIC	CLSI
ciprofloxacin	susceptible	<=	0.015	mg/L	MIC	CLSI
gentamicin	resistant	>	16	mg/L	MIC	CLSI
kanamycin	susceptible	<=	8	mg/L	MIC	CLSI
nalidixic acid	susceptible	==	2	mg/L	MIC	CLSI
streptomycin	resistant	==	64	mg/L	MIC	NARMS
sulfamethoxazole	resistant	>	512	mg/L	MIC	CLSI
tetracycline	susceptible	<=	4	mg/L	MIC	CLSI
trimethoprim-sulfamethoxazole	susceptible	<=	0.125/2.4	mg/L	MIC	CLSI

Pathogen: environmental/food/other sample from Salmonella enterica subsp. enteri...
Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica

biosample
Salmonella enterica subsp. enterica strain NY-32450, whole genome shotgun sequen...
Salmonella enterica subsp. enterica strain NY-32450, whole genome shotgun sequencing project
gi|1708635150|gb|AAIGOI000000000.1| I010000000

Nucleotide
Salmonella enterica subsp. enterica strain NY-32448, whole genome shotgun sequen...
Salmonella enterica subsp. enterica strain NY-32448, whole genome shotgun sequencing project
gi|1708635149|gb|AAIGOG000000000.1| G010000000

Nucleotide
Pathogen: environmental/food/other sample from Salmonella enterica subsp. enteri...
Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar 4,[5],12:i:-

biosample
Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain NY-29987, whole ...
Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain NY-29987, whole genome shotgun sequencing project
gi|1708635151|gb|AAIGOK000000000.1| K010000000

Nucleotide

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