Pathogen: environmental/food/other sample from Sal... - BioSample

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Organism: Salmonella enterica subsp. enterica
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica

Attributes

serovar	Typhimurium var. 5-
strain	NY-32412
isolation source	chicken breast
source type	food
Interagency Food Safety Analytics Collaboration (IFSAC) category	chicken
collection date	2003
geographic location	USA:CT
latitude and longitude	missing
collected by	United States Food and Drug Administration
NARMS isolate number	CVM 32412
sub species	enterica
food product origin geographic location	not provided
project name	GenomeTrakr; NARMS Retail Meat
sequenced by	New York State Department of Health
ontological term	chicken breast:FOODON_00002703
attribute_package	environmental/food/other

BioProject: PRJNA183850 Salmonella enterica
Retrieve all samples from this project

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Testing standard
amikacin	susceptible	<=	0.5	mg/L	MIC	CLSI
amoxicillin-clavulanic acid	resistant	>	32/16	mg/L	MIC	CLSI
ampicillin	resistant	>	32	mg/L	MIC	CLSI
cefoxitin	resistant	>	16	mg/L	MIC	CLSI
ceftiofur	resistant	>	8	mg/L	MIC	CLSI
ceftriaxone	resistant	==	8	mg/L	MIC	CLSI
chloramphenicol	susceptible	==	4	mg/L	MIC	CLSI
ciprofloxacin	susceptible	<=	0.015	mg/L	MIC	CLSI
gentamicin	susceptible	<=	0.25	mg/L	MIC	CLSI
kanamycin	resistant	>	64	mg/L	MIC	CLSI
nalidixic acid	susceptible	==	4	mg/L	MIC	CLSI
streptomycin	susceptible	<=	32	mg/L	MIC	NARMS
sulfamethoxazole	resistant	>	512	mg/L	MIC	CLSI
tetracycline	resistant	>	32	mg/L	MIC	CLSI
trimethoprim-sulfamethoxazole	susceptible	<=	0.125/2.4	mg/L	MIC	CLSI

Salmonella enterica subsp. enterica strain NY-32412, whole genome shotgun sequen...
Salmonella enterica subsp. enterica strain NY-32412, whole genome shotgun sequencing project
gi|1708300750|gb|AAIAZV000000000.1| V010000000

Nucleotide
Pathogen: environmental/food/other sample from Salmonella enterica subsp. enteri...
Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica

biosample
Salmonella enterica subsp. enterica strain NY-N12, whole genome shotgun sequenci...
Salmonella enterica subsp. enterica strain NY-N12, whole genome shotgun sequencing project
gi|1708300764|gb|AAIAZO000000000.1| O010000000

Nucleotide
Pathogen: environmental/food/other sample from Salmonella enterica subsp. enteri...
Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar 4,[5],12:r:-

biosample
Salmonella enterica subsp. enterica serovar 4,[5],12:r:- strain NY-N20131, whole...
Salmonella enterica subsp. enterica serovar 4,[5],12:r:- strain NY-N20131, whole genome shotgun sequencing project
gi|1708327642|gb|AAIBGJ000000000.1| J010000000

Nucleotide

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