One Health Enteric sample from Escherichia coli - BioSample - NCBI

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One Health Enteric sample from Escherichia coli

Identifiers: BioSample: SAMN38285456; Sample name: ECOL-21-VL-OH-IN-0022; SRA: SRS19559343

Organism: Escherichia coli
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia

Package: One Health Enteric; version 1.0

Attributes

strain	ECOL-21-VL-OH-IN-0022
collected by	Indiana Animal Disease Diagnostic Laboratory at Purdue University
collection date	2021-06-04
geographic location	USA: IL
isolation source	nasal swab
source type	animal
purpose of sampling	case investigation
project name	Vet-LIRN
sequenced by	Ohio Department of Agriculture\|Animal Disease Diagnostic Laboratory
host	Canis lupus familiaris
latitude and longitude	Not Provided

BioProject: PRJNA318589 Escherichia coli
Retrieve all samples from this project

Submission: Vet-LIRN-OH; 2023-11-16

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
ceftazidime	not defined	<=	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
enrofloxacin	not defined	>	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
imipenem	not defined	==	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
marbofloxacin	not defined	>	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
trimethoprim-sulfamethoxazole	not defined	>	4/76	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
amoxicillin-clavulanic acid	not defined	==	8/4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
ampicillin	not defined	>	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
cefovecin	not defined	>	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
doxycycline	not defined	==	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
gentamicin	not defined	>	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
orbifloxacin	not defined	>	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
pradofloxacin	not defined	>	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
cephalexin	not defined	>	16	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
tetracycline	not defined	>	16	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
amikacin	not defined	>	32	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
cefazolin	not defined	>	32	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
chloramphenicol	not defined	==	32	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI

Accession:: SAMN38285456
ID:: 38285456

BioProject SRA Nucleotide

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One Health Enteric sample from Escherichia coli
One Health Enteric sample from Escherichia coli

biosample
Pathogen: environmental/food/other sample from Escherichia coli
Pathogen: environmental/food/other sample from Escherichia coli

biosample
288601[BioProject] AND wgs master[prop] (30020)
Nucleotide
288601[BioProject] (30865)
Nucleotide

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