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BioProject

Organizing biological data

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Select item 11282601.

FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science

: Project data type: RefSeq Raw sequence reads

Scope:: Multispecies

NCBI

Accession:: PRJNA1128260
ID:: 1128260

Select item 8600852.

Monkeypox Outbreak

Taxonomy:: Monkeypox virus

: Umbrella project

NCBI

Accession:: PRJNA860085
ID:: 860085

Select item 6156253.

COVID-19 Outbreak

Taxonomy:: Severe acute respiratory syndrome coronavirus 2

: Umbrella project

NCBI

Accession:: PRJNA615625
ID:: 615625

Select item 3389294.

Prospective genome sequencing of multidrug-resistant bacterial pathogens

: Project data type: Other

Scope:: Monoisolate

University Hospital Muenster

Accession:: PRJEB8084
ID:: 338929

Select item 3251165.

Genome sequencing of A. baumannii to elucidate the molecular epidemiology

: Project data type: Other

Scope:: Monoisolate

University Hospital Muenster

Accession:: PRJEB7302
ID:: 325116

Select item 3164306.

CRE Outbreak Evaluation Set

: Umbrella project (Subtype: Disease)

NCBI

Accession:: PRJNA316430
ID:: 316430

Select item 3129727.

Klebsiella pneumoniae

Carbapenem-resistant Klebsiella pneumoniae characterized by the US Army

Taxonomy:: Klebsiella pneumoniae

: Project data type: Genome sequencing and assembly

Scope:: Multiisolate

Walter Reed Army Institute of Research

Accession:: PRJNA312972
ID:: 312972

Select item 3002708.

Acinetobacter baumannii

Acinetobacter baumannii collected within the U.S. military healthcare system

Taxonomy:: Acinetobacter baumannii

: Project data type: Genome sequencing and assembly

Scope:: Multiisolate

Walter Reed Army Institute of Research

Accession:: PRJNA300270
ID:: 300270

Select item 2944169.

FDA-CDC Antimicrobial Resistance Bank

: Umbrella project (Subtype: Disease)

NCBI

Accession:: PRJNA294416
ID:: 294416

Select item 29429510.

Salmonella enterica genome sequencing

: Umbrella project (Subtype: Disease)

Laboratory for Foodborne Zoonoses

Accession:: PRJNA294295
ID:: 294295

Select item 29290411.

Gram Negative Carbapenemase Detection Genome sequencing and assembly

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

Centers for Disease Control and Prevention

Accession:: PRJNA292904
ID:: 292904

Select item 29290212.

Enterobacteriaceae Carbapenemase Diversity genome sequencing and assembly

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

Centers for Disease Control and Prevention

Accession:: PRJNA292902
ID:: 292902

Select item 29290113.

Enterobacteriaceae Carbapenem Breakpoint genome sequencing and assembly

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

Centers for Disease Control and Prevention

Accession:: PRJNA292901
ID:: 292901

Select item 28530514.

Evaluation of WGS-based spa typing

Evaluation of WGS-based spa typing of S. aureus

: Project data type: Other

Scope:: Monoisolate

University Hospital Muenster

Accession:: PRJEB7089
ID:: 285305

Select item 27888615.

Antimicrobial Surveillance from Brigham & Women's Hospital, Boston MA

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

Brigham & Women's Hospital

Accession:: PRJNA278886
ID:: 278886

Select item 27328416.

GenomeTrakr Project: US Food and Drug Administration - CFSAN

Taxonomy:: Shigella

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

FDA Center for Food Safety and Applied Nutrition

Accession:: PRJNA273284
ID:: 273284

Select item 27186117.

Campylobacter Genome sequencing and assembly

Taxonomy:: Campylobacter

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

Fera

Accession:: PRJNA271861
ID:: 271861

Select item 25992518.

Salmonella enterica

GenomeTrakr Project: United Kingdom, Food and Environment Research Agency

Taxonomy:: Salmonella enterica

: Project data type: Genome sequencing and assembly

Scope:: Multiisolate

Fera

Accession:: PRJNA259925
ID:: 259925

Select item 25840219.

Cronobacter sp.

: Umbrella project

FDA/CFSAN

Accession:: PRJNA258402
ID:: 258402

Select item 25802120.

GenomeTrakr umbrella project for Campylobacter jejuni and Campylobacter coli

Taxonomy:: Campylobacter sp.

: Umbrella project

FDA/CFSAN

Accession:: PRJNA258021
ID:: 258021

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