The Centers for Disease Control and Prevention (CDC) and other health organizations are actively investigating the recent Monkeypox outbreak. Cases in the U.S. were first reported in 2022.
| Accession | PRJNA860085 |
| Type | Umbrella project |
| Keyword | GMI |
| Organism | Monkeypox virus[Taxonomy ID: 10244] Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Orthopoxvirus; Monkeypox virus |
| Submission | Registration date: 19-Jul-2022
NCBI |
| Relevance | Medical |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (Genomic DNA) | 1248 |
| SRA Experiments | 999 |
| Protein Sequences | 221787 |
| Other datasets |
| BioSample | 1316 |
| PopSet | 1 |
| Assembly | 881 |
This project encompasses the following 15 sub-projects:
| Project Type | Number of Projects |
| Genome sequencing |
10
4
14
|
BioProject
accession | Assembly
level | Name | Title |
|---|
| PRJNA887084 | SRA or Trace | MPXV | MPXV (Delaware Public Health Lab) | | PRJNA849619 | No data links | Monkeypox virus | Monkeypox virus Genome sequencing and assembly (Massachusetts State Public...) | | PRJNA849962 | SRA or Trace | Monkeypox virus | Monkeypox virus Genome sequencing and assembly (CDC Poxvirus and Rabies Branch) | | PRJNA866181 | SRA or Trace | Monkeypox virus | Monkeypox virus Genome sequencing and assembly (Arizona State Public Health Laboratory) (Arizona Department of Health...) | | PRJNA867405 | No data links | Monkeypox virus | Monkeypox virus Genome sequencing and assembly (University of Nebraska Medical Center) (University of Nebraska Medical...) | | PRJNA873698 | No data links | Monkeypox virus | Monkeypox virus Genome sequencing and assembly (CT Public Health Laboratory...) | | PRJNA875503 | No data links | Monkeypox virus | Monkeypox virus Genome sequencing and assembly (Oklahoma State Department of Health) (University of Nebraska Medical...) | | PRJNA875899 | SRA or Trace | Monkeypox virus | Monkeypox virus Genome sequencing and assembly (Idaho Bureau of Laboratories) | | PRJNA875934 | SRA or Trace | Monkeypox virus | Monkeypox virus Genome Sequencing and assembly (Florida Bureau of Public Health Laboratories) (FLDOH) | | PRJNA884422 | SRA or Trace | Monkeypox virus | Monkeypox virus Genome sequencing and assembly (CDPH) | | PRJNA886998 | SRA or Trace | Monkeypox virus | Monkeypox virus outbreak/surveillance at NJ State DOH, Public Health & Environmental Laboratories (NJ DOH PHEL Genome Sequencing...) | | PRJNA868697 | SRA or Trace | Monkeypox virus | Genome sequencing of Monkeypox virus clinical samples in Rhode Island (Rhode Island State Health...) | | PRJNA885468 | SRA or Trace | Monkeypox virus Genome sequencing and assembly (USAFSAM) | Monkeypox virus Genome sequencing and assembly (USAFSAM) (United States Air Force School...) | | PRJNA843095 | SRA or Trace | Monkeypox virus Zaire-96-I-16 | Monkeypox virus Zaire-96-I-16 Genome sequencing and assembly (Utah Public Health Laboratory...) |
Less... |
| Targeted Locus (Loci) | 1 |
BioProject
accession | Name | Title |
|---|
| PRJNA878833 | Monkeypox virus Genome sequencing and assembly (University of North Carolina at Chapel Hill) | Monkeypox virus Genome sequencing and assembly (University of North Carolina at Chapel Hill) (University of North Carolina...) |
|