Salmonella enterica (ID 628951) - BioProject

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Accession: PRJNA628951 ID: 628951

Salmonella enterica

Kansas State University Food Science Institute - Salmonella enterica

See Genome Information for Salmonella enterica

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This project is a component of the GenomeTrakr umbrella project for Salmonella enterica

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77 additional projects are components of the GenomeTrakr umbrella project for Salmonella enterica.

4015 additional projects are related by organism.

Characterization of Salmonella enterica isolates from Cambodian Informal Markets through Whole-Genome Sequencing

Accession	PRJNA628951
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Salmonella enterica[Taxonomy ID: 28901] Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Submission	Registration date: 20-May-2020 FDA Center for Food Safety and Applied Nutrition
Related Resources	Kansas State University Food Science Institute
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	81
SRA Experiments	83
Other datasets
BioSample	85
Assembly	81

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

81
81

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_010936935.1	AAPBFP000000000	SAMN13293552	CFSAN096641	Salmonella enterica
GCA_010935155.1	AAPBBZ000000000	SAMN13321506	CFSAN096608	Salmonella enterica
GCA_010944665.1	AAPBTO000000000	SAMN13293560	CFSAN096643	Salmonella enterica
GCA_010961195.1	AAOZWR000000000	SAMN13321510	CFSAN096606	Salmonella enterica
GCA_010946575.1	AAPBYN000000000	SAMN13322169	CFSAN096618	Salmonella enterica
GCA_010927635.1	AAOXHT000000000	SAMN13321595	CFSAN096622	Salmonella enterica
GCA_010895675.1	AAOXYW000000000	SAMN13321600	CFSAN096628	Salmonella enterica
GCA_010898765.1	AAOYDR000000000	SAMN13293549	CFSAN096653	Salmonella enterica
GCA_010895495.1	AAOYAQ000000000	SAMN13321619	CFSAN096625	Salmonella enterica
GCA_010902495.1	AAOYHR000000000	SAMN13321624	CFSAN096612	Salmonella enterica
GCA_010925095.1	AAOXFL000000000	SAMN13321598	CFSAN096629	Salmonella enterica
GCA_010924895.1	AAOXFD000000000	SAMN13321532	CFSAN096620	Salmonella enterica
GCA_010875565.1	AAOVVC000000000	SAMN13322423	CFSAN096616	Salmonella enterica
GCA_010872365.1	AAOVOL000000000	SAMN13293437	CFSAN096651	Salmonella enterica
GCA_010871885.1	AAOVNP000000000	SAMN13293495	CFSAN096636	Salmonella enterica
GCA_010871725.1	AAOVOG000000000	SAMN13293462	CFSAN096658	Salmonella enterica
GCA_010886935.1	AAOWKQ000000000	SAMN13293468	CFSAN096645	Salmonella enterica
GCA_010883755.1	AAOWPT000000000	SAMN13321591	CFSAN096623	Salmonella enterica
GCA_008269005.1	AAKBCQ000000000	SAMN12668245	VL-0618-5	Salmonella enterica
GCA_008268585.1	AAKBBL000000000	SAMN12663184	VL-0618-10	Salmonella enterica
GCA_008268345.1	AAKBAJ000000000	SAMN12663133	VL-0618-11	Salmonella enterica
GCA_008268125.1	AAKBAN000000000	SAMN12663163	VL-0618-13	Salmonella enterica
GCA_008268965.1	AAKBCK000000000	SAMN12668243	VL-0618-6	Salmonella enterica
GCA_008268165.1	AAKBBS000000000	SAMN12667774	VL-0618-12	Salmonella enterica
GCA_008268845.1	AAKBBW000000000	SAMN12668230	VL-0618-7	Salmonella enterica
GCA_008268745.1	AAKBBO000000000	SAMN12667725	VL-0618-15	Salmonella enterica
GCA_008266865.1	AAKAXV000000000	SAMN12662740	VL-0618-9	Salmonella enterica
GCA_013135505.1	JABGCS000000000	SAMN12663190	VL-0618-3	Salmonella enterica
GCA_011639175.1	AAQNRR000000000	SAMN13293094	VL-0618-31	Salmonella enterica
GCA_011650835.1	AAQOJH000000000	SAMN13293114	VL-0618-29	Salmonella enterica
GCA_011557315.1	AAQIHK000000000	SAMN13293256	VL-0618-23	Salmonella enterica
GCA_011556945.1	AAQIIF000000000	SAMN13293237	CFSAN096649	Salmonella enterica
GCA_011555795.1	AAQIFP000000000	SAMN13293179	CFSAN096648	Salmonella enterica
GCA_011555735.1	AAQIFK000000000	SAMN13293344	CFSAN096661	Salmonella enterica
GCA_011554415.1	AAQIBY000000000	SAMN13321593	CFSAN096631	Salmonella enterica
GCA_011530645.1	AAQGLD000000000	SAMN13293554	CFSAN096644	Salmonella enterica
GCA_011529505.1	AAQGIL000000000	SAMN13293551	CFSAN096655	Salmonella enterica
GCA_011544255.1	AAQHJG000000000	SAMN13322387	CFSAN096610	Salmonella enterica
GCA_011519765.1	AAQFWT000000000	SAMN13321589	CFSAN096632	Salmonella enterica
GCA_011624165.1	AAQMOL000000000	SAMN13321587	CFSAN096624	Salmonella enterica
GCA_011615225.1	AAQLZF000000000	SAMN13293326	CFSAN096659	Salmonella enterica
GCA_011614145.1	AAQMBA000000000	SAMN13293481	CFSAN096647	Salmonella enterica
GCA_011613505.1	AAQLUZ000000000	SAMN13293340	CFSAN096650	Salmonella enterica
GCA_011612885.1	AAQLVG000000000	SAMN13293509	CFSAN096652	Salmonella enterica
GCA_011594765.1	AAQKVT000000000	SAMN13293555	CFSAN096657	Salmonella enterica
GCA_011592845.1	AAQKQE000000000	SAMN13321508	CFSAN096619	Salmonella enterica
GCA_011573505.1	AAQJMM000000000	SAMN13293562	CFSAN096654	Salmonella enterica
GCA_011572065.1	AAQJIL000000000	SAMN13293455	VL-0618-26	Salmonella enterica
GCA_011590045.1	AAQKJJ000000000	SAMN13321502	CFSAN096611	Salmonella enterica
GCA_011570625.1	AAQJIM000000000	SAMN13293550	CFSAN096642	Salmonella enterica
GCA_011560545.1	AAQINH000000000	SAMN13293463	CFSAN096662	Salmonella enterica
GCA_011378105.1	AAPUSA000000000	SAMN13321528	CFSAN096613	Salmonella enterica
GCA_011377985.1	AAPURY000000000	SAMN13293513	CFSAN096638	Salmonella enterica
GCA_011376845.1	AAPUPR000000000	SAMN13293236	CFSAN096602	Salmonella enterica
GCA_011376225.1	AAPUPU000000000	SAMN13293548	CFSAN096640	Salmonella enterica
GCA_011324555.1	AAPUXJ000000000	SAMN13321604	CFSAN096627	Salmonella enterica
GCA_011515925.1	AAQFPZ000000000	SAMN13293464	CFSAN096646	Salmonella enterica
GCA_011256615.1	AAPRFQ000000000	SAMN13322444	CFSAN096617	Salmonella enterica
GCA_011256595.1	AAPRFR000000000	SAMN13322150	CFSAN096630	Salmonella enterica
GCA_011255995.1	AAPREJ000000000	SAMN13293250	VL-0618-22	Salmonella enterica
GCA_011255695.1	AAPREC000000000	SAMN13293559	CFSAN096639	Salmonella enterica
GCA_011177495.1	AAPMUB000000000	SAMN13293518	VL-0618-35	Salmonella enterica
GCA_011175895.1	AAPMWO000000000	SAMN13321512	CFSAN096604	Salmonella enterica
GCA_011175825.1	AAPMVH000000000	SAMN13293561	CFSAN096656	Salmonella enterica
GCA_011175415.1	AAPMWP000000000	SAMN13322378	CFSAN096615	Salmonella enterica
GCA_011185135.1	AAPLYZ000000000	SAMN13321513	CFSAN096603	Salmonella enterica
GCA_011184895.1	AAPLYY000000000	SAMN13293461	CFSAN096663	Salmonella enterica
GCA_010977615.1	AAPCYP000000000	SAMN13321503	CFSAN096609	Salmonella enterica
GCA_010980715.1	AAPDJJ000000000	SAMN13293349	CFSAN096660	Salmonella enterica
GCA_010981055.1	AAPDKA000000000	SAMN13293452	VL-0618-25	Salmonella enterica
GCA_010975375.1	AAPCTJ000000000	SAMN13293474	CFSAN096635	Salmonella enterica
GCA_010985435.1	AAPDIY000000000	SAMN13293254	VL-0618-24	Salmonella enterica
GCA_010985075.1	AAPDHS000000000	SAMN13293471	CFSAN096634	Salmonella enterica
GCA_010973055.1	AAOZSX000000000	SAMN13293478	CFSAN096637	Salmonella enterica
GCA_010963555.1	AAOZZM000000000	SAMN13322384	CFSAN096614	Salmonella enterica
GCA_010950655.1	AAPCHN000000000	SAMN13293118	VL-0618-28	Salmonella enterica
GCA_010968295.1	AAPAQG000000000	SAMN13321607	CFSAN096626	Salmonella enterica
GCA_010951775.1	AAPCJA000000000	SAMN13293095	VL-0618-30	Salmonella enterica
GCA_010951735.1	AAPCIY000000000	SAMN13293187	VL-0618-33	Salmonella enterica
GCA_010951695.1	AAPCIC000000000	SAMN13293252	VL-0618-37	Salmonella enterica
GCA_010937155.1	AAPBIM000000000	SAMN13322151	CFSAN096633	Salmonella enterica

SRA Data Details

Parameter	Value
Data volume, Gbases	13
Data volume, Mbytes	6439

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Salmonella enterica

Kansas State University Food Science Institute - Salmonella enterica

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