Salmonella enterica (ID 252015) - BioProject

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Accession: PRJNA252015 ID: 252015

Salmonella enterica

Salmonella enterica Genome sequencing and assembly

See Genome Information for Salmonella enterica

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This project is a component of the GenomeTrakr umbrella project for Salmonella enterica

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77 additional projects are components of the GenomeTrakr umbrella project for Salmonella enterica.

4015 additional projects are related by organism.

Surveillance of Salmonella Enteritidis using SNP based phylogenetic analysis.

Accession	PRJNA252015
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Salmonella enterica[Taxonomy ID: 28901] Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Submission	Registration date: 9-Jul-2019 Washington State Department of Health - Public Health Laboratories
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	105
SRA Experiments	113
Other datasets
BioSample	125
Assembly	105

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

105
105

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_007744015.1	AAITDL000000000	SAMN03151587	WAPHL_SAL-A00653	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_007745135.1	AAITGE000000000	SAMN03259200	WAPHL_SAL-A00677	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008030035.1	AAJLHU000000000	SAMN03085853	WAPHL_SAL-A00630	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008026715.1	AAJLCG000000000	SAMN03259190	WAPHL_SAL-A00667	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008007905.1	AAJJVS000000000	SAMN02929638	WAPHL_SAL-A00613	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008067945.1	AAJNTK000000000	SAMN03002800	WAPHL_SAL-A00620	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008029895.1	AAJLHY000000000	SAMN03085863	WAPHL_SAL-A00640	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008029935.1	AAJLHX000000000	SAMN03085860	WAPHL_SAL-A00637	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008029955.1	AAJLIB000000000	SAMN03085855	WAPHL_SAL-A00632	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008029915.1	AAJLHV000000000	SAMN03085861	WAPHL_SAL-A00638	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008029875.1	AAJLHZ000000000	SAMN03085856	WAPHL_SAL-A00633	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008029835.1	AAJLHT000000000	SAMN03085859	WAPHL_SAL-A00636	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008029815.1	AAJLHR000000000	SAMN03085862	WAPHL_SAL-A00639	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008029795.1	AAJLHW000000000	SAMN03085857	WAPHL_SAL-A00634	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008029715.1	AAJLHP000000000	SAMN03085858	WAPHL_SAL-A00635	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008028915.1	AAJLFU000000000	SAMN03259193	WAPHL_SAL-A00670	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008028815.1	AAJLFM000000000	SAMN03259192	WAPHL_SAL-A00669	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008028875.1	AAJLFT000000000	SAMN03259197	WAPHL_SAL-A00674	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008028755.1	AAJLFN000000000	SAMN03259199	WAPHL_SAL-A00676	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008028575.1	AAJLEY000000000	SAMN03277872	WAPHL_SAL-A00678	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008028555.1	AAJLEV000000000	SAMN03259194	WAPHL_SAL-A00671	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008028515.1	AAJLFC000000000	SAMN03259196	WAPHL_SAL-A00673	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008028475.1	AAJLES000000000	SAMN03277875	WAPHL_SAL-A00681	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008028415.1	AAJLEQ000000000	SAMN03259191	WAPHL_SAL-A00668	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008028395.1	AAJLER000000000	SAMN03277876	WAPHL_SAL-A00682	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008028355.1	AAJLEP000000000	SAMN03277877	WAPHL_SAL-A00683	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008028335.1	AAJLEK000000000	SAMN03277874	WAPHL_SAL-A00680	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008028295.1	AAJLEL000000000	SAMN03259198	WAPHL_SAL-A00675	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008031955.1	AAJLLF000000000	SAMN03097368	WAPHL_SAL-A00651	Salmonella enterica subsp. enterica serovar Newport
GCA_008031975.1	AAJLLG000000000	SAMN03097366	WAPHL_SAL-A00649	Salmonella enterica subsp. enterica serovar Newport
GCA_008031935.1	AAJLLD000000000	SAMN03097365	WAPHL_SAL-A00648	Salmonella enterica subsp. enterica serovar Newport
GCA_008031905.1	AAJLLB000000000	SAMN03151585	WAPHL_SAL-A00659	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008031635.1	AAJLLE000000000	SAMN03097367	WAPHL_SAL-A00650	Salmonella enterica subsp. enterica serovar Newport
GCA_008031035.1	AAJLKB000000000	SAMN03097361	WAPHL_SAL-A00644	Salmonella enterica subsp. enterica serovar Newport
GCA_008030655.1	AAJLIX000000000	SAMN03097364	WAPHL_SAL-A00647	Salmonella enterica subsp. enterica serovar Newport
GCA_008030395.1	AAJLIS000000000	SAMN03097362	WAPHL_SAL-A00645	Salmonella enterica subsp. enterica serovar Newport
GCA_008025595.1	AAJKZZ000000000	SAMN03151591	WAPHL_SAL-A00657	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008025615.1	AAJLAC000000000	SAMN03097363	WAPHL_SAL-A00646	Salmonella enterica subsp. enterica serovar Newport
GCA_008025455.1	AAJLCM000000000	SAMN03259189	WAPHL_SAL-A00666	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008025295.1	AAJLCO000000000	SAMN03259195	WAPHL_SAL-A00672	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008025055.1	AAJLAG000000000	SAMN03151589	WAPHL_SAL-A00655	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008024315.1	AAJLAA000000000	SAMN03151590	WAPHL_SAL-A00656	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008024175.1	AAJLAB000000000	SAMN03151592	WAPHL_SAL-A00658	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008024085.1	AAJKZV000000000	SAMN03151588	WAPHL_SAL-A00654	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008023515.1	AAJKWF000000000	SAMN03151586	WAPHL_SAL-A00652	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_006769445.1	AAGFNC000000000	SAMN03085854	WAPHL_SAL-A00631	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_007228915.1	AAHJKG000000000	SAMN04575452	PNUSAS001808	Salmonella enterica subsp. enterica serovar Florida
GCA_010123165.1	AANENH000000000	SAMN03002804	WAPHL_SAL-A00624	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_010405595.1	AANRNG000000000	SAMN03097360	WAPHL_SAL-A00643	Salmonella enterica subsp. enterica serovar Javiana
GCA_010456925.1	AANUTG000000000	SAMN03002799	WAPHL_SAL-A00619	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_010635005.1	AAOFLP000000000	SAMN03097358	WAPHL_SAL-A00641	Salmonella enterica subsp. enterica serovar Javiana
GCA_010649905.1	AAOGLY000000000	SAMN03097359	WAPHL_SAL-A00642	Salmonella enterica subsp. enterica serovar Javiana
GCA_008747295.1	AALEDF000000000	SAMN04358658	WAPHL_SAL-A01149	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008746975.1	AALEDH000000000	SAMN04359699	WAPHL_SAL-A00933	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008750855.1	AALEDE000000000	SAMN04358657	WAPHL_SAL-A01148	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008749575.1	AALEDD000000000	SAMN04358659	WAPHL_SAL-A01150	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008746055.1	AALEDK000000000	SAMN04358652	WAPHL_SAL-A01143	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008745995.1	AALEDL000000000	SAMN04358655	WAPHL_SAL-A01146	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008745975.1	AALEDJ000000000	SAMN04359700	WAPHL_SAL-A00930	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008745955.1	AALEDP000000000	SAMN04358653	WAPHL_SAL-A01144	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008845545.1	AALJEZ000000000	SAMN04358654	WAPHL_SAL-A01145	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008614555.1	AAKWXQ000000000	SAMN03892144	WAPHL_SAL-A00917	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008613905.1	AAKWWZ000000000	SAMN03892141	WAPHL_SAL-A00914	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008613825.1	AAKWXA000000000	SAMN03892140	WAPHL_SAL-A00913	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008637765.1	AAKYBQ000000000	SAMN03892139	WAPHL_SAL-A00912	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008637685.1	AAKYBY000000000	SAMN03892138	WAPHL_SAL-A00911	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008637665.1	AAKYBR000000000	SAMN03892143	WAPHL_SAL-A00916	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008647355.1	AAKZDL000000000	SAMN04158558	WAPHL_SAL-A00934	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008636505.1	AAKYBK000000000	SAMN03892142	WAPHL_SAL-A00915	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008645695.1	AAKYZD000000000	SAMN04124310	WAPHL_SAL-A00940	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008643655.1	AAKYZA000000000	SAMN04124311	WAPHL_SAL-A00937	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008645115.1	AAKYZC000000000	SAMN04124313	WAPHL_SAL-A00938	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008644975.1	AAKYYZ000000000	SAMN04124314	WAPHL_SAL-A00939	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008644595.1	AAKYZE000000000	SAMN04124312	WAPHL_SAL-A00941	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008644875.1	AAKZDN000000000	SAMN04158557	WAPHL_SAL-A00935	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008644855.1	AAKZDJ000000000	SAMN04158574	WAPHL_SAL-A00932	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008071195.1	AAJNRY000000000	SAMN03002807	WAPHL_SAL-A00627	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008070315.1	AAJNSW000000000	SAMN02929640	WAPHL_SAL-A00615	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008070255.1	AAJNSP000000000	SAMN03002798	WAPHL_SAL-A00618	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008070215.1	AAJNSV000000000	SAMN03002805	WAPHL_SAL-A00625	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008070135.1	AAJNSQ000000000	SAMN03002808	WAPHL_SAL-A00628	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008070095.1	AAJNSN000000000	SAMN03002801	WAPHL_SAL-A00621	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008070115.1	AAJNSR000000000	SAMN03002802	WAPHL_SAL-A00622	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008088225.1	AAJOOP000000000	SAMN03002803	WAPHL_SAL-A00623	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008088085.1	AAJONN000000000	SAMN03002806	WAPHL_SAL-A00626	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008087845.1	AAJOOA000000000	SAMN02929639	WAPHL_SAL-A00614	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008087725.1	AAJONP000000000	SAMN02929641	WAPHL_SAL-A00616	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008114305.1	AAJQKP000000000	SAMN03421227	WAPHL_SAL-A00895	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008114185.1	AAJQKQ000000000	SAMN03421218	WAPHL_SAL-A00886	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008114145.1	AAJQKF000000000	SAMN03421220	WAPHL_SAL-A00888	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008114125.1	AAJQKJ000000000	SAMN03421223	WAPHL_SAL-A00891	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008114105.1	AAJQKB000000000	SAMN03421228	WAPHL_SAL-A00896	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008114085.1	AAJQKE000000000	SAMN03421217	WAPHL_SAL-A00885	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008114025.1	AAJQKC000000000	SAMN03421222	WAPHL_SAL-A00890	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008113605.1	AAJQJY000000000	SAMN03421216	WAPHL_SAL-A00884	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008113625.1	AAJQJU000000000	SAMN03421221	WAPHL_SAL-A00889	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008113565.1	AAJQJZ000000000	SAMN03421224	WAPHL_SAL-A00892	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008113465.1	AAJQJX000000000	SAMN03421226	WAPHL_SAL-A00894	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008113405.1	AAJQKD000000000	SAMN03421219	WAPHL_SAL-A00887	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_011088385.1	AAPFZJ000000000	SAMN03277873	WAPHL_SAL-A00679	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_011087385.1	AAPFYQ000000000	SAMN03421225	WAPHL_SAL-A00893	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_016332205.1	AAYGFG000000000	SAMN04358651	WAPHL_SAL-A01142	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_016326905.1	AAYFVL000000000	SAMN04158575	WAPHL_SAL-A00931	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_016375325.1	AAYIXN000000000	SAMN04358656	WAPHL_SAL-A01147	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_016375185.1	AAYIXM000000000	SAMN04358650	WAPHL_SAL-A01141	Salmonella enterica subsp. enterica serovar Enteritidis

SRA Data Details

Parameter	Value
Data volume, Gbases	44
Data volume, Mbytes	27679

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Salmonella enterica Genome sequencing and assembly

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