Localization of the squalene synthase gene (FDFT1) to human chromosome 8p22-p23.1
- PMID: 8020937
- DOI: 10.1006/geno.1994.1135
Localization of the squalene synthase gene (FDFT1) to human chromosome 8p22-p23.1
Abstract
Recently, we reported the isolation of a cDNA encoding the human enzyme squalene synthase, the first step of sterol biosynthesis uniquely committed to synthesis of cholesterol (6). As such, it is likely that this enzyme occupies a critical regulatory position in the synthesis of cholesterol. As part of continuing studies of the role of this gene in cellular metabolism, we undertook the mapping of this gene on the human chromosomes. To localize the gene, we have first isolated a yeast artificial chromosome (YAC) containing the squalene synthase gene. We then used fluorescence in situ hybridization (FISH) with yeast DNA containing the YAC to localize the gene to chromosome 8. Assignment to human chromosome 8 was confirmed by polymerase chain reaction analysis of a somatic cell hybrid containing human chromosome 8. Use of a somatic cell hybrid regional mapping panel dividing chromosome 8 into several fragments localized the gene to 8p21-pter. Fractional length analysis of the FISH mapping placed the signal generated with this YAC at 8p22-p23.1.
Similar articles
-
Isolation of a human YAC contig encompassing a cluster of UGT2 genes and its regional localization to chromosome 4q13.Genomics. 1994 Sep 15;23(2):496-9. doi: 10.1006/geno.1994.1531. Genomics. 1994. PMID: 7835904
-
A human chromosome 7 yeast artificial chromosome (YAC) resource: construction, characterization, and screening.Genomics. 1995 Jan 1;25(1):170-83. doi: 10.1016/0888-7543(95)80123-4. Genomics. 1995. PMID: 7774915
-
Regional localization of 725 human chromosome 7-specific yeast artificial chromosome clones.Genomics. 1994 Jul 15;22(2):439-48. doi: 10.1006/geno.1994.1407. Genomics. 1994. PMID: 7806232
-
Roles of Farnesyl-Diphosphate Farnesyltransferase 1 in Tumour and Tumour Microenvironments.Cells. 2020 Oct 25;9(11):2352. doi: 10.3390/cells9112352. Cells. 2020. PMID: 33113804 Free PMC article. Review.
-
Structure and regulation of mammalian squalene synthase.Biochim Biophys Acta. 2000 Dec 15;1529(1-3):49-62. doi: 10.1016/s1388-1981(00)00137-2. Biochim Biophys Acta. 2000. PMID: 11111077 Review.
Cited by
-
Genomic divergences among cattle, dog and human estimated from large-scale alignments of genomic sequences.BMC Genomics. 2006 Jun 7;7:140. doi: 10.1186/1471-2164-7-140. BMC Genomics. 2006. PMID: 16759380 Free PMC article.
-
Genetic polymorphisms in the mevalonate pathway affect the therapeutic response to alendronate treatment in postmenopausal Chinese women with low bone mineral density.Pharmacogenomics J. 2015 Apr;15(2):158-64. doi: 10.1038/tpj.2014.52. Epub 2014 Sep 16. Pharmacogenomics J. 2015. PMID: 25223561
-
The association between hepatic fat content and liver injury in obese children and adolescents: effects of ethnicity, insulin resistance, and common gene variants.Diabetes Care. 2013 May;36(5):1353-60. doi: 10.2337/dc12-1791. Epub 2012 Dec 28. Diabetes Care. 2013. PMID: 23275357 Free PMC article.
-
Physical mapping of the holoprosencephaly critical region in 21q22.3, exclusion of SIM2 as a candidate gene for holoprosencephaly, and mapping of SIM2 to a region of chromosome 21 important for Down syndrome.Am J Hum Genet. 1995 Nov;57(5):1074-9. Am J Hum Genet. 1995. PMID: 7485157 Free PMC article.
-
Squalene Synthase Deficiency: Clinical, Biochemical, and Molecular Characterization of a Defect in Cholesterol Biosynthesis.Am J Hum Genet. 2018 Jul 5;103(1):125-130. doi: 10.1016/j.ajhg.2018.05.004. Epub 2018 Jun 14. Am J Hum Genet. 2018. PMID: 29909962 Free PMC article.
Publication types
MeSH terms
Substances
Grants and funding
LinkOut - more resources
Full Text Sources
Other Literature Sources
Molecular Biology Databases
Research Materials