{"id":13095,"date":"2024-04-16T09:59:13","date_gmt":"2024-04-16T13:59:13","guid":{"rendered":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/?p=13095"},"modified":"2024-04-22T10:02:09","modified_gmt":"2024-04-22T14:02:09","slug":"new-refseq-annotations-5","status":"publish","type":"post","link":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2024\/04\/16\/new-refseq-annotations-5\/","title":{"rendered":"New RefSeq Annotations Now Available!"},"content":{"rendered":"<p>In February and March, the <a class=\"external-link\" title=\"Follow link\" href=\"https:\/\/www.ncbi.nlm.nih.gov\/genome\/annotation_euk\/?utm_source=ncbi_insights&amp;utm_medium=referral&amp;utm_campaign=refseq-update-20240416\" target=\"_blank\" rel=\"nofollow noopener\">NCBI Eukaryotic Genome Annotation Pipeline<\/a> released <a href=\"https:\/\/www.ncbi.nlm.nih.gov\/datasets\/genome\/?accession=GCF_000001635.27%2CGCF_001625215.2%2CGCF_015220805.1%2CGCF_018983055.1%2CGCF_021018805.1%2CGCF_023053635.1%2CGCF_024139115.2%2CGCF_026151205.1%2CGCF_027409185.1%2CGCF_028390025.1%2CGCF_028858775.2%2CGCF_028878055.2%2CGCF_028885625.2%2CGCF_028885655.2%2CGCF_029281585.2%2CGCF_029289425.2%2CGCF_029407905.1%2CGCF_030014385.1%2CGCF_030269925.1%2CGCF_030705265.1%2CGCF_032062105.1%2CGCF_032445375.1%2CGCF_034190915.1%2CGCF_034315485.1%2CGCF_034640455.1%2CGCF_034702125.1%2CGCF_035046485.1%2CGCF_035149785.1%2CGCF_035594125.1%2CGCF_035594765.1%2CGCF_035770615.1%2CGCF_036172545.1%2CGCF_036172605.1%2CGCF_036321145.1%2CGCF_036323735.1%2CGCF_036324505.1%2CGCF_036588685.1%2CGCF_036711695.1%2CGCF_910591565.1%2CGCF_947568885.1%2CGCF_948474715.1%2CGCF_963556715.1%2CGCF_963678635.1%2CGCF_963855985.1%2CGCF_963921235.1%2CGCF_963924245.1&amp;utm_source=ncbi_insights&amp;utm_medium=referral&amp;utm_campaign=refseq-update-20240416\">forty-six new annotations<\/a>\u00a0in\u00a0<a class=\"external-link\" title=\"Follow link\" href=\"https:\/\/www.ncbi.nlm.nih.gov\/refseq\/about\/?utm_source=ncbi_insights&amp;utm_medium=referral&amp;utm_campaign=refseq-update-20240416\" target=\"_blank\" rel=\"nofollow noopener\">RefSeq<\/a>!<\/p>\n<h5>New Annotations<\/h5>\n<ul>\n<li><span style=\"font-size: 17px;\">Aedes albopictus (Asian tiger mosquito)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Anolis carolinensis (green anole)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Armigeres subalbatus (mosquito)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Bacillus rossius redtenbacheri (walking stick)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Bolinopsis microptera (comb jelly)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Bombyx mori (domestic silkworm)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Bubalus kerabau (carabao)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Candoia aspera (snake)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Cavia porcellus (domestic guinea pig)\u00a0<\/span><\/li>\n<li><!--more--><span style=\"font-size: 17px;\">Chroicocephalus ridibundus (black-headed gull)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Culicoides brevitarsis (fly)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Cydia amplana (moth)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Cydia fagiglandana (moth)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Cydia splendana (moth)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Cydia strobilella (moth)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Cynocephalus volans (Philippine flying lemur)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Daucus carota subsp. sativus (carrot)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Diachasmimorpha longicaudata (wasp)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Eleginops maclovinus (Patagonian blennie)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Elgaria multicarinata webbii (lizard)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Engraulis encrasicolus (European anchovy)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Gorilla gorilla gorilla (western lowland gorilla) <em>(pictured)<\/em><\/span><\/li>\n<li><span style=\"font-size: 17px;\">Helicoverpa armigera (cotton bollworm)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Melospiza melodia melodia (song sparrow)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Mobula hypostoma (lesser devil ray)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Mus musculus (house mouse)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Mytilus trossulus (common blue mussel)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Ostrinia nubilalis (European corn borer)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Pan paniscus (pygmy chimpanzee)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Pan troglodytes (chimpanzee)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Pelmatolapia mariae (spotted tilapia)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Pelobates fuscus (common spadefoot toad)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Penaeus indicus (crustacean)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Pezoporus occidentalis (night parrot)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Pogoniulus pusillus (Red-fronted tinkerbird)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Pongo abelii (Sumatran orangutan)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Pongo pygmaeus (Bornean orangutan)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Prinia subflava (tawny-flanked prinia)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Pseudophryne corroboree (corroboree frog)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Rattus norvegicus (Norway rat)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Saccostrea cucullata (small rock oyster)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Scylla paramamosain (green mud crab)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Symphalangus syndactylus (siamang)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Symsagittifera roscoffensis (acoel flatworm)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Trichomycterus rosablanca (bony fish)<\/span><\/li>\n<li><span style=\"font-size: 17px;\">Zophobas morio (beetle)<\/span><\/li>\n<\/ul>\n<p>View the full list of annotated eukaryotes available in the <a class=\"external-link\" title=\"Follow link\" href=\"https:\/\/www.ncbi.nlm.nih.gov\/genome\/gdv\/?utm_source=ncbi_insights&amp;utm_medium=referral&amp;utm_campaign=refseq-update-20240416\" target=\"_blank\" rel=\"nofollow noopener\">Genome Data Viewer (GDV) genome browser<\/a>. You can download genome sequence and metadata using the\u00a0<a class=\"external-link\" title=\"Follow link\" href=\"https:\/\/www.ncbi.nlm.nih.gov\/datasets\/docs\/v2\/how-tos\/genomes\/download-genome\/?utm_source=ncbi_insights&amp;utm_medium=referral&amp;utm_campaign=refseq-update-20240416\" target=\"_blank\" rel=\"nofollow noopener\">NCBI Datasets command line tool<\/a>.<\/p>\n<h5>Stay up to date<\/h5>\n<p>RefSeq is part of the\u00a0<a href=\"https:\/\/www.ncbi.nlm.nih.gov\/comparative-genomics-resource\/?utm_source=ncbi_insights&amp;utm_medium=referral&amp;utm_campaign=refseq-update-20240416\">NIH Comparative Genomics Resource (CGR)<\/a>.\u00a0<span data-contrast=\"none\">CGR facilitates reliable comparative genomics analyses\u202ffor all eukaryotic organisms through an NCBI Toolkit and community collaboration.\u202f\u202f\u202f<\/span><span data-ccp-props=\"{&quot;134233117&quot;:true,&quot;134233118&quot;:true,&quot;201341983&quot;:0,&quot;335559739&quot;:160,&quot;335559740&quot;:240}\">\u00a0<\/span><\/p>\n<p>CGR also makes it easier to navigate between a variety of NCBI data and tools. To find out what\u2019s in the RefSeq annotation pipeline, check out the\u00a0<a href=\"https:\/\/www.ncbi.nlm.nih.gov\/datasets\/genome\/?utm_source=ncbi_insights&amp;utm_medium=referral&amp;utm_campaign=refseq-update-20240416\">new table<\/a>\u00a0in NCBI Datasets with information on the latest eukaryotic RefSeq annotations.<\/p>\n<p><a class=\"external-link\" href=\"https:\/\/public.govdelivery.com\/accounts\/USNLMOCPL\/subscriber\/new?topic_id=USNLMOCPL_50%22\" rel=\"nofollow\">Join our mailing list<\/a>\u00a0and follow us on social\u00a0<a href=\"https:\/\/twitter.com\/NCBI\">@NCBI<\/a>\u00a0to keep up to date with RefSeq and other CGR news.<\/p>\n<h5>Questions?<\/h5>\n<p><span data-ccp-props=\"{&quot;201341983&quot;:0,&quot;335559739&quot;:0,&quot;335559740&quot;:240}\">If you have questions or would like to provide feedback, please\u202f<a href=\"https:\/\/support.nlm.nih.gov\/support\/create-case\/\">write to our help desk<\/a>.<\/span><\/p>\n","protected":false},"excerpt":{"rendered":"<p>In February and March, the NCBI Eukaryotic Genome Annotation Pipeline released forty-six new annotations\u00a0in\u00a0RefSeq! New Annotations Aedes albopictus (Asian tiger mosquito) Anolis carolinensis (green anole) Armigeres subalbatus (mosquito) Bacillus rossius redtenbacheri (walking stick) Bolinopsis microptera (comb jelly) Bombyx mori (domestic silkworm) Bubalus kerabau (carabao) Candoia aspera (snake) Cavia porcellus (domestic guinea pig)\u00a0<\/p>\n","protected":false},"author":42204617,"featured_media":13104,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_coblocks_attr":"","_coblocks_dimensions":"","_coblocks_responsive_height":"","_coblocks_accordion_ie_support":"","jetpack_post_was_ever_published":false,"_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":false,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_memberships_contains_paid_content":false,"footnotes":"","jetpack_publicize_message":"New RefSeq Annotations Now Available!","jetpack_publicize_feature_enabled":true,"jetpack_social_post_already_shared":true,"jetpack_social_options":{"image_generator_settings":{"template":"highway","enabled":false},"version":2}},"categories":[2248],"tags":[693060768,693060851,574294629,574293891,693060836,27739816],"table_tags":[],"class_list":["post-13095","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-whats-new","tag-comparative-genomics-resource-cgr","tag-eukaryote-genome-annotation-pipeline-egap","tag-eukaryotic-genome-annotation","tag-genome-data-viewer","tag-ncbi-datasets","tag-refseq"],"jetpack_publicize_connections":[],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v24.6 - https:\/\/yoast.com\/wordpress\/plugins\/seo\/ -->\n<title>New RefSeq Annotations Now Available! - NCBI Insights<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2024\/04\/16\/new-refseq-annotations-5\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"New RefSeq Annotations Now Available! - NCBI Insights\" \/>\n<meta property=\"og:description\" content=\"In February and March, the NCBI Eukaryotic Genome Annotation Pipeline released forty-six new annotations\u00a0in\u00a0RefSeq! 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