{"id":11588,"date":"2023-06-12T12:33:44","date_gmt":"2023-06-12T16:33:44","guid":{"rendered":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/?p=11588"},"modified":"2023-06-12T12:33:44","modified_gmt":"2023-06-12T16:33:44","slug":"may-2023-release-pgap","status":"publish","type":"post","link":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/","title":{"rendered":"New! May 2023 Release of Stand-Alone PGAP"},"content":{"rendered":"<p>We are happy to announce the release of a <a href=\"https:\/\/github.com\/ncbi\/pgap\/releases\/tag\/2023-05-17.build6771\">new version<\/a> of the stand-alone <a href=\"https:\/\/github.com\/ncbi\/pgap\">Prokaryotic Genome Annotation Pipeline<\/a> (PGAP) with many exciting new features.<\/p>\n<h5>Improved user interface<\/h5>\n<p>This version has an improved user interface that takes the genome FASTA file and associated organism name directly on the command line. For example, to annotate a <em>Vibrio cholerae<\/em> genome sequence in the file Vchol.fasta:<\/p>\n<p><tt>pgap.py -r -g Vchol.fasta -s 'Vibrio cholerae' -o Vchol.annot<\/tt><\/p>\n<p>For more details visit our <a href=\"https:\/\/github.com\/ncbi\/pgap\/wiki\/Quick-Start\">Quick Start<\/a> page. <!--more--><\/p>\n<h5>Additional output files for better interoperability<\/h5>\n<p>In addition to the <span style=\"color: #000000;\">GFF<\/span>, GenBank, and protein FASTA annotation files that PGAP has always produced, it now provides:<\/p>\n<ul>\n<li><strong>annot_cds_from_genomic.fna<\/strong>: nucleotide sequences in FASTA format of all coding sequence (CDS) features annotated on the assembly, based on the genome sequence.<\/li>\n<li><strong>annot_translated_cds.faa<\/strong>: protein sequences in FASTA format of CDS features annotated on the genomic records. The sequences are the conceptual translation of the nucleotide sequence provided in the <strong>annot_cds_from_genomic.fna.gz<\/strong> file.<\/li>\n<li><strong>annot_with_genomic_fasta.gff<\/strong>: annotation in GFF format followed by the ## FASTA pragma and the genomic sequence(s) in FASTA format. This makes the file directly useable by <a href=\"https:\/\/sanger-pathogens.github.io\/Roary\/\">Roary<\/a>.<\/li>\n<\/ul>\n<h5>More Gene Ontology (GO) terms in the annotation<\/h5>\n<p>PGAP assigns function to predicted proteins based on hits to <a href=\"https:\/\/www.ncbi.nlm.nih.gov\/protfam?utm_source=ncbi_insights&amp;utm_medium=referral&amp;utm_campaign=pgap-release-20230612\">Protein Family Models<\/a>, such as protein profile HMMs, Blast hits, and domain architectures. New in this release, <a href=\"http:\/\/geneontology.org\/\">GO terms<\/a> and <a href=\"https:\/\/iubmb.qmul.ac.uk\/enzyme\/\">Enzyme Commision (EC) numbers<\/a> associated with domain architectures are inherited by the annotated proteins. On average, 50% of proteins annotated on a genome are annotated with at least one GO term.<\/p>\n<p>And, as every previous release, this release comes with incremental improvements by expert curators of the Protein Family Model collection that drives the precision of PGAP\u2019s structural and functional annotation.<\/p>\n<h5>Stay up to date<\/h5>\n<p><span data-contrast=\"none\">Follow us on Twitter\u202f<\/span><a href=\"https:\/\/twitter.com\/ncbi\"><span data-contrast=\"none\">@NCBI<\/span><\/a><span data-contrast=\"none\">\u202fand<\/span><span data-contrast=\"none\">\u00a0j<\/span><a href=\"https:\/\/public.govdelivery.com\/accounts\/USNLMOCPL\/subscriber\/new?topic_id=USNLMOCPL_50%22\"><span data-contrast=\"none\">oin our mailing list<\/span><\/a><span data-contrast=\"none\"> to keep up to date with PGAP and other NCBI news.<\/span><span data-contrast=\"none\">\u00a0<\/span><span data-ccp-props=\"{&quot;201341983&quot;:0,&quot;335559739&quot;:160,&quot;335559740&quot;:259}\">\u00a0<\/span><\/p>\n<h5>We want to hear from you!<\/h5>\n<p>Please try this new version and <a href=\"https:\/\/github.com\/ncbi\/pgap\/issues\">share your experience<\/a> with us.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>We are happy to announce the release of a new version of the stand-alone Prokaryotic Genome Annotation Pipeline (PGAP) with many exciting new features. Improved user interface This version has an improved user interface that takes the genome FASTA file and associated organism name directly on the command line. For example, to annotate a Vibrio &hellip; <a href=\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/\" class=\"more-link\">Continue reading <span class=\"screen-reader-text\">New! May 2023 Release of Stand-Alone PGAP<\/span> <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":42204617,"featured_media":11620,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_coblocks_attr":"","_coblocks_dimensions":"","_coblocks_responsive_height":"","_coblocks_accordion_ie_support":"","jetpack_post_was_ever_published":false,"_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":false,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_memberships_contains_paid_content":false,"footnotes":"","jetpack_publicize_message":"New! May 2023 Release of Stand-Alone PGAP","jetpack_publicize_feature_enabled":true,"jetpack_social_post_already_shared":true,"jetpack_social_options":{"image_generator_settings":{"template":"highway","enabled":false},"version":2}},"categories":[2248],"tags":[693060700,15779425,693060702],"table_tags":[],"class_list":["post-11588","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-whats-new","tag-hidden-markov-models-hmm","tag-pgap","tag-protein-family-model"],"jetpack_publicize_connections":[],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v24.6 - https:\/\/yoast.com\/wordpress\/plugins\/seo\/ -->\n<title>New! May 2023 Release of Stand-Alone PGAP - NCBI Insights<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"New! May 2023 Release of Stand-Alone PGAP - NCBI Insights\" \/>\n<meta property=\"og:description\" content=\"We are happy to announce the release of a new version of the stand-alone Prokaryotic Genome Annotation Pipeline (PGAP) with many exciting new features. Improved user interface This version has an improved user interface that takes the genome FASTA file and associated organism name directly on the command line. For example, to annotate a Vibrio &hellip; Continue reading New! May 2023 Release of Stand-Alone PGAP &rarr;\" \/>\n<meta property=\"og:url\" content=\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/\" \/>\n<meta property=\"og:site_name\" content=\"NCBI Insights\" \/>\n<meta property=\"article:publisher\" content=\"https:\/\/www.facebook.com\/ncbi.nlm\" \/>\n<meta property=\"article:published_time\" content=\"2023-06-12T16:33:44+00:00\" \/>\n<meta property=\"og:image\" content=\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/wp-content\/uploads\/2023\/06\/PGAP_Blog-2-e1686580607597.png\" \/>\n\t<meta property=\"og:image:width\" content=\"1100\" \/>\n\t<meta property=\"og:image:height\" content=\"575\" \/>\n\t<meta property=\"og:image:type\" content=\"image\/png\" \/>\n<meta name=\"author\" content=\"NCBI Staff\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:creator\" content=\"@NCBI\" \/>\n<meta name=\"twitter:site\" content=\"@NCBI\" \/>\n<meta name=\"twitter:label1\" content=\"Written by\" \/>\n\t<meta name=\"twitter:data1\" content=\"NCBI Staff\" \/>\n\t<meta name=\"twitter:label2\" content=\"Est. reading time\" \/>\n\t<meta name=\"twitter:data2\" content=\"2 minutes\" \/>\n<script type=\"application\/ld+json\" class=\"yoast-schema-graph\">{\"@context\":\"https:\/\/schema.org\",\"@graph\":[{\"@type\":\"Article\",\"@id\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/#article\",\"isPartOf\":{\"@id\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/\"},\"author\":{\"name\":\"NCBI Staff\",\"@id\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/#\/schema\/person\/4f41ea6a31cea38a9a1b1419c048e50b\"},\"headline\":\"New! May 2023 Release of Stand-Alone PGAP\",\"datePublished\":\"2023-06-12T16:33:44+00:00\",\"mainEntityOfPage\":{\"@id\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/\"},\"wordCount\":348,\"commentCount\":1,\"publisher\":{\"@id\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/#organization\"},\"image\":{\"@id\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/#primaryimage\"},\"thumbnailUrl\":\"https:\/\/i0.wp.com\/ncbiinsights.ncbi.nlm.nih.gov\/wp-content\/uploads\/2023\/06\/PGAP_Blog-2-e1686580607597.png?fit=1100%2C575&ssl=1\",\"keywords\":[\"Hidden Markov Models (HMM)\",\"NCBI Prokaryotic Genome Annotation Pipeline (PGAP)\",\"Protein Family Model\"],\"articleSection\":[\"What's New\"],\"inLanguage\":\"en-US\",\"potentialAction\":[{\"@type\":\"CommentAction\",\"name\":\"Comment\",\"target\":[\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/#respond\"]}]},{\"@type\":\"WebPage\",\"@id\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/\",\"url\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/\",\"name\":\"New! May 2023 Release of Stand-Alone PGAP - NCBI Insights\",\"isPartOf\":{\"@id\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/#website\"},\"primaryImageOfPage\":{\"@id\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/#primaryimage\"},\"image\":{\"@id\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/#primaryimage\"},\"thumbnailUrl\":\"https:\/\/i0.wp.com\/ncbiinsights.ncbi.nlm.nih.gov\/wp-content\/uploads\/2023\/06\/PGAP_Blog-2-e1686580607597.png?fit=1100%2C575&ssl=1\",\"datePublished\":\"2023-06-12T16:33:44+00:00\",\"breadcrumb\":{\"@id\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/#breadcrumb\"},\"inLanguage\":\"en-US\",\"potentialAction\":[{\"@type\":\"ReadAction\",\"target\":[\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/\"]}]},{\"@type\":\"ImageObject\",\"inLanguage\":\"en-US\",\"@id\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/#primaryimage\",\"url\":\"https:\/\/i0.wp.com\/ncbiinsights.ncbi.nlm.nih.gov\/wp-content\/uploads\/2023\/06\/PGAP_Blog-2-e1686580607597.png?fit=1100%2C575&ssl=1\",\"contentUrl\":\"https:\/\/i0.wp.com\/ncbiinsights.ncbi.nlm.nih.gov\/wp-content\/uploads\/2023\/06\/PGAP_Blog-2-e1686580607597.png?fit=1100%2C575&ssl=1\",\"width\":1100,\"height\":575,\"caption\":\"Image of DNA bases in the background in red, blue and green. Text says: Now available! Prokaryotic Genome Annotation Pipeline (PGAP) Now Available\"},{\"@type\":\"BreadcrumbList\",\"@id\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/#breadcrumb\",\"itemListElement\":[{\"@type\":\"ListItem\",\"position\":1,\"name\":\"Home\",\"item\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/\"},{\"@type\":\"ListItem\",\"position\":2,\"name\":\"New! May 2023 Release of Stand-Alone PGAP\"}]},{\"@type\":\"WebSite\",\"@id\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/#website\",\"url\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/\",\"name\":\"National Center for Biotechnology Information\",\"description\":\"News about NCBI resources and events\",\"publisher\":{\"@id\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/#organization\"},\"potentialAction\":[{\"@type\":\"SearchAction\",\"target\":{\"@type\":\"EntryPoint\",\"urlTemplate\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/?s={search_term_string}\"},\"query-input\":{\"@type\":\"PropertyValueSpecification\",\"valueRequired\":true,\"valueName\":\"search_term_string\"}}],\"inLanguage\":\"en-US\"},{\"@type\":\"Organization\",\"@id\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/#organization\",\"name\":\"National Center for Biotechnology Information\",\"alternateName\":\"NCBI\",\"url\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/\",\"logo\":{\"@type\":\"ImageObject\",\"inLanguage\":\"en-US\",\"@id\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/#\/schema\/logo\/image\/\",\"url\":\"https:\/\/i0.wp.com\/ncbiinsights.ncbi.nlm.nih.gov\/wp-content\/uploads\/2023\/03\/nih-nlm-ncbi-two-color.png?fit=6374%2C760&ssl=1\",\"contentUrl\":\"https:\/\/i0.wp.com\/ncbiinsights.ncbi.nlm.nih.gov\/wp-content\/uploads\/2023\/03\/nih-nlm-ncbi-two-color.png?fit=6374%2C760&ssl=1\",\"width\":6374,\"height\":760,\"caption\":\"National Center for Biotechnology Information\"},\"image\":{\"@id\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/#\/schema\/logo\/image\/\"},\"sameAs\":[\"https:\/\/www.facebook.com\/ncbi.nlm\",\"https:\/\/x.com\/NCBI\",\"https:\/\/www.linkedin.com\/company\/ncbinlm\/\"]},{\"@type\":\"Person\",\"@id\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/#\/schema\/person\/4f41ea6a31cea38a9a1b1419c048e50b\",\"name\":\"NCBI Staff\",\"image\":{\"@type\":\"ImageObject\",\"inLanguage\":\"en-US\",\"@id\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/#\/schema\/person\/image\/\",\"url\":\"https:\/\/secure.gravatar.com\/avatar\/f706d65e16bb6bb171b72b4b26f66276?s=96&d=identicon&r=g\",\"contentUrl\":\"https:\/\/secure.gravatar.com\/avatar\/f706d65e16bb6bb171b72b4b26f66276?s=96&d=identicon&r=g\",\"caption\":\"NCBI Staff\"},\"description\":\"The National Center for Biotechnology Information (NCBI), a division of the U.S. National Library of Medicine, provides access to scientific and biomedical databases, software tools for analyzing molecular data, and performs research in computational biology.\",\"sameAs\":[\"http:\/\/ncbiinsights.wordpress.com\"],\"url\":\"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/author\/ncbiinsights\/\"}]}<\/script>\n<!-- \/ Yoast SEO plugin. -->","yoast_head_json":{"title":"New! May 2023 Release of Stand-Alone PGAP - NCBI Insights","robots":{"index":"index","follow":"follow","max-snippet":"max-snippet:-1","max-image-preview":"max-image-preview:large","max-video-preview":"max-video-preview:-1"},"canonical":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/","og_locale":"en_US","og_type":"article","og_title":"New! May 2023 Release of Stand-Alone PGAP - NCBI Insights","og_description":"We are happy to announce the release of a new version of the stand-alone Prokaryotic Genome Annotation Pipeline (PGAP) with many exciting new features. Improved user interface This version has an improved user interface that takes the genome FASTA file and associated organism name directly on the command line. For example, to annotate a Vibrio &hellip; Continue reading New! May 2023 Release of Stand-Alone PGAP &rarr;","og_url":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/","og_site_name":"NCBI Insights","article_publisher":"https:\/\/www.facebook.com\/ncbi.nlm","article_published_time":"2023-06-12T16:33:44+00:00","og_image":[{"width":1100,"height":575,"url":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/wp-content\/uploads\/2023\/06\/PGAP_Blog-2-e1686580607597.png","type":"image\/png"}],"author":"NCBI Staff","twitter_card":"summary_large_image","twitter_creator":"@NCBI","twitter_site":"@NCBI","twitter_misc":{"Written by":"NCBI Staff","Est. reading time":"2 minutes"},"schema":{"@context":"https:\/\/schema.org","@graph":[{"@type":"Article","@id":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/#article","isPartOf":{"@id":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/"},"author":{"name":"NCBI Staff","@id":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/#\/schema\/person\/4f41ea6a31cea38a9a1b1419c048e50b"},"headline":"New! May 2023 Release of Stand-Alone PGAP","datePublished":"2023-06-12T16:33:44+00:00","mainEntityOfPage":{"@id":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/"},"wordCount":348,"commentCount":1,"publisher":{"@id":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/#organization"},"image":{"@id":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/#primaryimage"},"thumbnailUrl":"https:\/\/i0.wp.com\/ncbiinsights.ncbi.nlm.nih.gov\/wp-content\/uploads\/2023\/06\/PGAP_Blog-2-e1686580607597.png?fit=1100%2C575&ssl=1","keywords":["Hidden Markov Models (HMM)","NCBI Prokaryotic Genome Annotation Pipeline (PGAP)","Protein Family Model"],"articleSection":["What's New"],"inLanguage":"en-US","potentialAction":[{"@type":"CommentAction","name":"Comment","target":["https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/#respond"]}]},{"@type":"WebPage","@id":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/","url":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/","name":"New! May 2023 Release of Stand-Alone PGAP - NCBI Insights","isPartOf":{"@id":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/#website"},"primaryImageOfPage":{"@id":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/#primaryimage"},"image":{"@id":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/#primaryimage"},"thumbnailUrl":"https:\/\/i0.wp.com\/ncbiinsights.ncbi.nlm.nih.gov\/wp-content\/uploads\/2023\/06\/PGAP_Blog-2-e1686580607597.png?fit=1100%2C575&ssl=1","datePublished":"2023-06-12T16:33:44+00:00","breadcrumb":{"@id":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/#breadcrumb"},"inLanguage":"en-US","potentialAction":[{"@type":"ReadAction","target":["https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/"]}]},{"@type":"ImageObject","inLanguage":"en-US","@id":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/#primaryimage","url":"https:\/\/i0.wp.com\/ncbiinsights.ncbi.nlm.nih.gov\/wp-content\/uploads\/2023\/06\/PGAP_Blog-2-e1686580607597.png?fit=1100%2C575&ssl=1","contentUrl":"https:\/\/i0.wp.com\/ncbiinsights.ncbi.nlm.nih.gov\/wp-content\/uploads\/2023\/06\/PGAP_Blog-2-e1686580607597.png?fit=1100%2C575&ssl=1","width":1100,"height":575,"caption":"Image of DNA bases in the background in red, blue and green. Text says: Now available! Prokaryotic Genome Annotation Pipeline (PGAP) Now Available"},{"@type":"BreadcrumbList","@id":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/2023\/06\/12\/may-2023-release-pgap\/#breadcrumb","itemListElement":[{"@type":"ListItem","position":1,"name":"Home","item":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/"},{"@type":"ListItem","position":2,"name":"New! May 2023 Release of Stand-Alone PGAP"}]},{"@type":"WebSite","@id":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/#website","url":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/","name":"National Center for Biotechnology Information","description":"News about NCBI resources and events","publisher":{"@id":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/#organization"},"potentialAction":[{"@type":"SearchAction","target":{"@type":"EntryPoint","urlTemplate":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/?s={search_term_string}"},"query-input":{"@type":"PropertyValueSpecification","valueRequired":true,"valueName":"search_term_string"}}],"inLanguage":"en-US"},{"@type":"Organization","@id":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/#organization","name":"National Center for Biotechnology Information","alternateName":"NCBI","url":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/","logo":{"@type":"ImageObject","inLanguage":"en-US","@id":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/#\/schema\/logo\/image\/","url":"https:\/\/i0.wp.com\/ncbiinsights.ncbi.nlm.nih.gov\/wp-content\/uploads\/2023\/03\/nih-nlm-ncbi-two-color.png?fit=6374%2C760&ssl=1","contentUrl":"https:\/\/i0.wp.com\/ncbiinsights.ncbi.nlm.nih.gov\/wp-content\/uploads\/2023\/03\/nih-nlm-ncbi-two-color.png?fit=6374%2C760&ssl=1","width":6374,"height":760,"caption":"National Center for Biotechnology Information"},"image":{"@id":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/#\/schema\/logo\/image\/"},"sameAs":["https:\/\/www.facebook.com\/ncbi.nlm","https:\/\/x.com\/NCBI","https:\/\/www.linkedin.com\/company\/ncbinlm\/"]},{"@type":"Person","@id":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/#\/schema\/person\/4f41ea6a31cea38a9a1b1419c048e50b","name":"NCBI Staff","image":{"@type":"ImageObject","inLanguage":"en-US","@id":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/#\/schema\/person\/image\/","url":"https:\/\/secure.gravatar.com\/avatar\/f706d65e16bb6bb171b72b4b26f66276?s=96&d=identicon&r=g","contentUrl":"https:\/\/secure.gravatar.com\/avatar\/f706d65e16bb6bb171b72b4b26f66276?s=96&d=identicon&r=g","caption":"NCBI Staff"},"description":"The National Center for Biotechnology Information (NCBI), a division of the U.S. National Library of Medicine, provides access to scientific and biomedical databases, software tools for analyzing molecular data, and performs research in computational biology.","sameAs":["http:\/\/ncbiinsights.wordpress.com"],"url":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/author\/ncbiinsights\/"}]}},"jetpack_featured_media_url":"https:\/\/i0.wp.com\/ncbiinsights.ncbi.nlm.nih.gov\/wp-content\/uploads\/2023\/06\/PGAP_Blog-2-e1686580607597.png?fit=1100%2C575&ssl=1","jetpack_likes_enabled":true,"jetpack_sharing_enabled":true,"jetpack_shortlink":"https:\/\/wp.me\/p2Tuqy-30U","amp_enabled":true,"_links":{"self":[{"href":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/wp-json\/wp\/v2\/posts\/11588","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/wp-json\/wp\/v2\/users\/42204617"}],"replies":[{"embeddable":true,"href":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/wp-json\/wp\/v2\/comments?post=11588"}],"version-history":[{"count":10,"href":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/wp-json\/wp\/v2\/posts\/11588\/revisions"}],"predecessor-version":[{"id":11623,"href":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/wp-json\/wp\/v2\/posts\/11588\/revisions\/11623"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/wp-json\/wp\/v2\/media\/11620"}],"wp:attachment":[{"href":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/wp-json\/wp\/v2\/media?parent=11588"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/wp-json\/wp\/v2\/categories?post=11588"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/wp-json\/wp\/v2\/tags?post=11588"},{"taxonomy":"table_tags","embeddable":true,"href":"https:\/\/ncbiinsights.ncbi.nlm.nih.gov\/wp-json\/wp\/v2\/table_tags?post=11588"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}