Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs9332131

Current Build 157

Released September 3, 2024

Organism
Homo sapiens
Position
chr10:94949282-94949283 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
delA / dupA
Variation Type
Indel Insertion and Deletion
Frequency
delA=0.0003817 (533/1396472, GnomAD_exomes)
delA=0.003748 (992/264690, TOPMED)
delA=0.003157 (471/149204, GnomAD_genomes) (+ 7 more)
delA=0.000945 (114/120632, ExAC)
delA=0.00038 (34/88472, ALFA)
delA=0.00520 (409/78698, PAGE_STUDY)
delA=0.00001 (1/77418, 38KJPN)
delA=0.00376 (47/12516, GO-ESP)
delA=0.0025 (16/6404, 1000G_30X)
delA=0.0022 (11/5008, 1000G)
Clinical Significance
Reported in ClinVar
Gene : Consequence
CYP2C9 : Frameshift Variant
Publications
28 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315
Population Group Sample Size Ref Allele Alt Allele Ref HMOZ Alt HMOZ HTRZ HWEP
Total Global 88472 AA=0.99962 A=0.00038, AAA=0.00000 0.999231 0.0 0.000769 0
European Sub 75456 AA=1.00000 A=0.00000, AAA=0.00000 1.0 0.0 0.0 N/A
African Sub 4292 AA=0.9928 A=0.0072, AAA=0.0000 0.985555 0.0 0.014445 0
African Others Sub 174 AA=0.994 A=0.006, AAA=0.000 0.988506 0.0 0.011494 0
African American Sub 4118 AA=0.9927 A=0.0073, AAA=0.0000 0.98543 0.0 0.01457 0
Asian Sub 3330 AA=1.0000 A=0.0000, AAA=0.0000 1.0 0.0 0.0 N/A
East Asian Sub 2674 AA=1.0000 A=0.0000, AAA=0.0000 1.0 0.0 0.0 N/A
Other Asian Sub 656 AA=1.000 A=0.000, AAA=0.000 1.0 0.0 0.0 N/A
Latin American 1 Sub 436 AA=1.000 A=0.000, AAA=0.000 1.0 0.0 0.0 N/A
Latin American 2 Sub 928 AA=1.000 A=0.000, AAA=0.000 1.0 0.0 0.0 N/A
South Asian Sub 274 AA=1.000 A=0.000, AAA=0.000 1.0 0.0 0.0 N/A
Other Sub 3756 AA=0.9992 A=0.0008, AAA=0.0000 0.998403 0.0 0.001597 0


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
gnomAD v4 - Exomes Global Study-wide 1396472 AA=0.9996183 delA=0.0003817
gnomAD v4 - Exomes European Sub 1162390 AA=0.9999243 delA=0.0000757
gnomAD v4 - Exomes South Asian Sub 85626 AA=0.99999 delA=0.00001
gnomAD v4 - Exomes American Sub 44392 AA=0.99950 delA=0.00050
gnomAD v4 - Exomes East Asian Sub 39382 AA=1.00000 delA=0.00000
gnomAD v4 - Exomes African Sub 33280 AA=0.98738 delA=0.01262
gnomAD v4 - Exomes Ashkenazi Jewish Sub 26006 AA=1.00000 delA=0.00000
gnomAD v4 - Exomes Middle Eastern sub 5396 AA=0.9996 delA=0.0004
TopMed Global Study-wide 264690 AA=0.996252 delA=0.003748
gnomAD v4 - Genomes Global Study-wide 149204 AA=0.996843 delA=0.003157
gnomAD v4 - Genomes European Sub 78618 AA=0.99992 delA=0.00008
gnomAD v4 - Genomes African Sub 41564 AA=0.98920 delA=0.01080
gnomAD v4 - Genomes American Sub 15264 AA=0.99895 delA=0.00105
gnomAD v4 - Genomes East Asian Sub 5174 AA=1.0000 delA=0.0000
gnomAD v4 - Genomes South Asian Sub 4818 AA=1.0000 delA=0.0000
gnomAD v4 - Genomes Ashkenazi Jewish Sub 3472 AA=1.0000 delA=0.0000
gnomAD v4 - Genomes Middle Eastern sub 294 AA=1.000 delA=0.000
ExAC Global Study-wide 120632 AA=0.999055 delA=0.000945
ExAC Europe Sub 73014 AA=0.99997 delA=0.00003
ExAC Asian Sub 25018 AA=1.00000 delA=0.00000
ExAC American Sub 11398 AA=0.99965 delA=0.00035
ExAC African Sub 10298 AA=0.98951 delA=0.01049
ExAC Other Sub 904 AA=1.000 delA=0.000
Allele Frequency Aggregator Total Global 88472 AA=0.99962 delA=0.00038, dupA=0.00000
Allele Frequency Aggregator European Sub 75456 AA=1.00000 delA=0.00000, dupA=0.00000
Allele Frequency Aggregator African Sub 4292 AA=0.9928 delA=0.0072, dupA=0.0000
Allele Frequency Aggregator Other Sub 3756 AA=0.9992 delA=0.0008, dupA=0.0000
Allele Frequency Aggregator Asian Sub 3330 AA=1.0000 delA=0.0000, dupA=0.0000
Allele Frequency Aggregator Latin American 2 Sub 928 AA=1.000 delA=0.000, dupA=0.000
Allele Frequency Aggregator Latin American 1 Sub 436 AA=1.000 delA=0.000, dupA=0.000
Allele Frequency Aggregator South Asian Sub 274 AA=1.000 delA=0.000, dupA=0.000
The PAGE Study Global Study-wide 78698 AA=0.99480 delA=0.00520
The PAGE Study AfricanAmerican Sub 32514 AA=0.98902 delA=0.01098
The PAGE Study Mexican Sub 10810 AA=0.99972 delA=0.00028
The PAGE Study Asian Sub 8318 AA=0.9999 delA=0.0001
The PAGE Study PuertoRican Sub 7916 AA=0.9977 delA=0.0023
The PAGE Study NativeHawaiian Sub 4534 AA=0.9998 delA=0.0002
The PAGE Study Cuban Sub 4230 AA=0.9993 delA=0.0007
The PAGE Study Dominican Sub 3828 AA=0.9943 delA=0.0057
The PAGE Study CentralAmerican Sub 2450 AA=0.9992 delA=0.0008
The PAGE Study SouthAmerican Sub 1982 AA=1.0000 delA=0.0000
The PAGE Study NativeAmerican Sub 1260 AA=0.9984 delA=0.0016
The PAGE Study SouthAsian Sub 856 AA=1.000 delA=0.000
38KJPN JAPANESE Study-wide 77418 AA=0.99999 delA=0.00001
GO Exome Sequencing Project Global Study-wide 12516 AA=0.99624 delA=0.00376
GO Exome Sequencing Project European American Sub 8252 AA=0.9999 delA=0.0001
GO Exome Sequencing Project African American Sub 4264 AA=0.9892 delA=0.0108
1000Genomes_30X Global Study-wide 6404 AA=0.9975 delA=0.0025
1000Genomes_30X African Sub 1786 AA=0.9910 delA=0.0090
1000Genomes_30X Europe Sub 1266 AA=1.0000 delA=0.0000
1000Genomes_30X South Asian Sub 1202 AA=1.0000 delA=0.0000
1000Genomes_30X East Asian Sub 1170 AA=1.0000 delA=0.0000
1000Genomes_30X American Sub 980 AA=1.000 delA=0.000
1000Genomes Global Study-wide 5008 AA=0.9978 delA=0.0022
1000Genomes African Sub 1322 AA=0.9917 delA=0.0083
1000Genomes East Asian Sub 1008 AA=1.0000 delA=0.0000
1000Genomes Europe Sub 1006 AA=1.0000 delA=0.0000
1000Genomes South Asian Sub 978 AA=1.000 delA=0.000
1000Genomes American Sub 694 AA=1.000 delA=0.000
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 10 NC_000010.11:g.94949283del
GRCh38.p14 chr 10 NC_000010.11:g.94949283dup
GRCh37.p13 chr 10 NC_000010.10:g.96709040del
GRCh37.p13 chr 10 NC_000010.10:g.96709040dup
CYP2C9 RefSeqGene (LRG_1195) NG_008385.2:g.16126del
CYP2C9 RefSeqGene (LRG_1195) NG_008385.2:g.16126dup
Gene: CYP2C9, cytochrome P450 family 2 subfamily C member 9 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
CYP2C9 transcript NM_000771.4:c.818del K [AAG] > R [AG] Coding Sequence Variant
cytochrome P450 2C9 NP_000762.2:p.Lys273fs K (Lys) > R (Arg) Frameshift Variant
CYP2C9 transcript NM_000771.4:c.818dup K [AAG] > K [AAAG] Coding Sequence Variant
cytochrome P450 2C9 NP_000762.2:p.Glu274fs K (Lys) > K (Lys) Frameshift Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Allele: delA (allele ID: 269838 )
ClinVar Accession Disease Names Clinical Significance
RCV000363569.9 not provided Other,Benign-Likely-Benign
RCV000787932.2 Flurbiprofen response Drug-Response
RCV000788096.2 Lesinurad response Drug-Response
RCV000788102.2 Piroxicam response Drug-Response
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement AA= delA dupA
GRCh38.p14 chr 10 NC_000010.11:g.94949282_94949283= NC_000010.11:g.94949283del NC_000010.11:g.94949283dup
GRCh37.p13 chr 10 NC_000010.10:g.96709039_96709040= NC_000010.10:g.96709040del NC_000010.10:g.96709040dup
CYP2C9 RefSeqGene (LRG_1195) NG_008385.2:g.16125_16126= NG_008385.2:g.16126del NG_008385.2:g.16126dup
CYP2C9 transcript NM_000771.4:c.817_818= NM_000771.4:c.818del NM_000771.4:c.818dup
CYP2C9 transcript NM_000771.3:c.817_818= NM_000771.3:c.818del NM_000771.3:c.818dup
cytochrome P450 2C9 NP_000762.2:p.Lys273= NP_000762.2:p.Lys273fs NP_000762.2:p.Glu274fs
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

43 SubSNP, 10 Frequency, 4 ClinVar submissions
No Submitter Submission ID Date (Build)
1 EGP_SNPS ss12588510 Dec 05, 2003 (119)
2 ILLUMINA ss107695406 Feb 06, 2009 (130)
3 ILLUMINA ss160978127 Dec 01, 2009 (131)
4 ILLUMINA ss174814670 Jul 04, 2010 (132)
5 ILLUMINA ss482863012 Sep 08, 2015 (146)
6 ILLUMINA ss537588040 Sep 08, 2015 (146)
7 1000GENOMES ss1369948495 Aug 21, 2014 (142)
8 EVA_EXAC ss1711945910 Apr 01, 2015 (144)
9 ILLUMINA ss1946289807 Feb 12, 2016 (147)
10 ILLUMINA ss1959285041 Feb 12, 2016 (147)
11 ILLUMINA ss2632748500 Nov 08, 2017 (151)
12 ILLUMINA ss2710717593 Nov 08, 2017 (151)
13 GNOMAD ss2738421697 Nov 08, 2017 (151)
14 GNOMAD ss2748441738 Nov 08, 2017 (151)
15 GNOMAD ss2892146281 Nov 08, 2017 (151)
16 AFFY ss2984920011 Nov 08, 2017 (151)
17 AFFY ss2985568282 Nov 08, 2017 (151)
18 ILLUMINA ss3021264941 Nov 08, 2017 (151)
19 ILLUMINA ss3021264942 Nov 08, 2017 (151)
20 ILLUMINA ss3625584983 Oct 12, 2018 (152)
21 ILLUMINA ss3626510084 Oct 12, 2018 (152)
22 ILLUMINA ss3636102367 Oct 12, 2018 (152)
23 ILLUMINA ss3637867330 Oct 12, 2018 (152)
24 ILLUMINA ss3642869395 Oct 12, 2018 (152)
25 ILLUMINA ss3644542553 Oct 12, 2018 (152)
26 ILLUMINA ss3651623366 Oct 12, 2018 (152)
27 ILLUMINA ss3651623367 Oct 12, 2018 (152)
28 ILLUMINA ss3653690747 Oct 12, 2018 (152)
29 ILLUMINA ss3725179538 Jul 13, 2019 (153)
30 ILLUMINA ss3744074674 Jul 13, 2019 (153)
31 PAGE_CC ss3771575744 Jul 13, 2019 (153)
32 KHV_HUMAN_GENOMES ss3813836694 Jul 13, 2019 (153)
33 EVA ss3824541081 Apr 26, 2020 (154)
34 TOPMED ss4862683981 Apr 26, 2021 (155)
35 TOMMO_GENOMICS ss6114217636 Nov 01, 2024 (157)
36 GNOMAD ss6440427590 Nov 01, 2024 (157)
37 GNOMAD ss6859927329 Nov 01, 2024 (157)
38 1000G_HIGH_COVERAGE ss8285093540 Nov 01, 2024 (157)
39 HUGCELL_USP ss8480552153 Nov 01, 2024 (157)
40 1000G_HIGH_COVERAGE ss8579573677 Nov 01, 2024 (157)
41 SANFORD_IMAGENETICS ss8624255738 Nov 01, 2024 (157)
42 SANFORD_IMAGENETICS ss8649889222 Nov 01, 2024 (157)
43 TOMMO_GENOMICS ss8745196292 Nov 01, 2024 (157)
44 1000Genomes NC_000010.10 - 96709039 Oct 12, 2018 (152)
45 1000Genomes_30X NC_000010.11 - 94949282 Nov 01, 2024 (157)
46 ExAC NC_000010.10 - 96709039 Oct 12, 2018 (152)
47 gnomAD v4 - Exomes NC_000010.11 - 94949282 Nov 01, 2024 (157)
48 gnomAD v4 - Genomes NC_000010.11 - 94949282 Nov 01, 2024 (157)
49 GO Exome Sequencing Project NC_000010.10 - 96709039 Oct 12, 2018 (152)
50 The PAGE Study NC_000010.11 - 94949282 Jul 13, 2019 (153)
51 38KJPN NC_000010.11 - 94949282 Nov 01, 2024 (157)
52 TopMed NC_000010.11 - 94949282 Apr 26, 2021 (155)
53 ALFA NC_000010.11 - 94949282 Nov 01, 2024 (157)
54 ClinVar RCV000363569.9 Nov 01, 2024 (157)
55 ClinVar RCV000787932.2 Oct 16, 2022 (156)
56 ClinVar RCV000788096.2 Oct 16, 2022 (156)
57 ClinVar RCV000788102.2 Oct 16, 2022 (156)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs386621785 Aug 21, 2014 (142)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss160978127, ss3642869395 NC_000010.9:96699028:A: NC_000010.11:94949281:AA:A (self)
51061864, 242239, 998762, ss482863012, ss537588040, ss1369948495, ss1711945910, ss1946289807, ss1959285041, ss2632748500, ss2710717593, ss2738421697, ss2748441738, ss2892146281, ss2984920011, ss2985568282, ss3021264941, ss3021264942, ss3625584983, ss3626510084, ss3636102367, ss3637867330, ss3644542553, ss3651623366, ss3651623367, ss3653690747, ss3744074674, ss3824541081, ss8624255738, ss8649889222 NC_000010.10:96709038:A: NC_000010.11:94949281:AA:A (self)
67099612, 35749430, 387063114, 797213, 131593456, 78229636, ss3725179538, ss3771575744, ss3813836694, ss4862683981, ss6114217636, ss6440427590, ss6859927329, ss8285093540, ss8480552153, ss8579573677, ss8745196292 NC_000010.11:94949281:A: NC_000010.11:94949281:AA:A (self)
RCV000363569.9, RCV000787932.2, RCV000788096.2, RCV000788102.2, 9848865691 NC_000010.11:94949281:AA:A NC_000010.11:94949281:AA:A (self)
ss12588510, ss107695406, ss174814670 NT_030059.13:47513502:A: NC_000010.11:94949281:AA:A (self)
9848865691 NC_000010.11:94949281:AA:AAA NC_000010.11:94949281:AA:AAA (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

28 citations for rs9332131
PMID Title Author Year Journal
18466099 Influence of CYP2C9 and VKORC1 on warfarin dose, anticoagulation attainment and maintenance among European-Americans and African-Americans. Limdi NA et al. 2008 Pharmacogenomics
18752379 Warfarin pharmacogenetics. Limdi NA et al. 2008 Pharmacotherapy
19955245 Warfarin sensitivity genotyping: a review of the literature and summary of patient experience. Moyer TP et al. 2009 Mayo Clinic proceedings
20150829 Cytochrome P450 2C9-CYP2C9. Van Booven D et al. 2010 Pharmacogenetics and genomics
20203262 Warfarin pharmacogenetics: a single VKORC1 polymorphism is predictive of dose across 3 racial groups. Limdi NA et al. 2010 Blood
20214591 Pharmacogenomics in aspirin intolerance. Agúndez JA et al. 2009 Current drug metabolism
20709439 Warfarin dosing in patients with impaired kidney function. Limdi NA et al. 2010 American journal of kidney diseases
21639946 Genetic factors associated with patient-specific warfarin dose in ethnic Indonesians. Suriapranata IM et al. 2011 BMC medical genetics
21918509 Pharmacogenomics: application to the management of cardiovascular disease. Johnson JA et al. 2011 Clinical pharmacology and therapeutics
22186998 Pharmacogenetic warfarin dose refinements remain significantly influenced by genetic factors after one week of therapy. Horne BD et al. 2012 Thrombosis and haemostasis
22329724 Predicting warfarin dosage in European-Americans and African-Americans using DNA samples linked to an electronic health record. Ramirez AH et al. 2012 Pharmacogenomics
22676711 Pharmacogenomics of warfarin in populations of African descent. Suarez-Kurtz G et al. 2013 British journal of clinical pharmacology
24944790 Screening for 392 polymorphisms in 141 pharmacogenes. Kim JY et al. 2014 Biomedical reports
25714468 A systematic approach to the reporting of medically relevant findings from whole genome sequencing. McLaughlin HM et al. 2014 BMC medical genetics
26785747 Polymorphisms in genes involved in the absorption, distribution, metabolism, and excretion of drugs in the Kazakhs of Kazakhstan. Iskakova AN et al. 2016 BMC genetics
27453700 Prediction of Warfarin Dose in Pediatric Patients: An Evaluation of the Predictive Performance of Several Models. Marek E et al. 2016 The journal of pediatric pharmacology and therapeutics
29218998 VKORC1-1639A allele influences warfarin maintenance dosage among Blacks receiving warfarin anticoagulation: a retrospective cohort study. Mili FD et al. 2018 Future cardiology
29681089 Genetic variation in biotransformation enzymes, air pollution exposures, and risk of spina bifida. Padula AM et al. 2018 American journal of medical genetics. Part A
30486437 Impact of CYP2C9 and VKORC1 Polymorphisms on Warfarin Sensitivity and Responsiveness in Jordanian Cardiovascular Patients during the Initiation Therapy. Al-Eitan LN et al. 2018 Genes
30758238 Development and Cross-Validation of High-Resolution Melting Analysis-Based Cardiovascular Pharmacogenetics Genotyping Panel. Langaee T et al. 2019 Genetic testing and molecular biomarkers
31869433 Genetic Factors Influencing Warfarin Dose in Black-African Patients: A Systematic Review and Meta-Analysis. Asiimwe IG et al. 2020 Clinical pharmacology and therapeutics
32380173 Recommendations for Clinical Warfarin Genotyping Allele Selection: A Report of the Association for Molecular Pathology and the College of American Pathologists. Pratt VM et al. 2020 The Journal of molecular diagnostics
34621706 Comprehensive analysis of important pharmacogenes in Koreans using the DMET™ platform. Kim B et al. 2021 Translational and clinical pharmacology
34958284 Warfarin Pharmacogenomics for Precision Medicine in Real-Life Clinical Practice in Southern Africa: Harnessing 73 Variants in 29 Pharmacogenes. Muyambo S et al. 2022 Omics
35089958 Identification of pharmacogenetic variants from large scale next generation sequencing data in the Saudi population. Goljan E et al. 2022 PloS one
35761855 Pharmacogenetics of Breast Cancer Treatments: A Sub-Saharan Africa Perspective. Nthontho KC et al. 2022 Pharmacogenomics and personalized medicine
36164570 Prevalence of exposure to pharmacogenetic drugs by the Saudis treated at the health care centers of the Ministry of National Guard. Alshabeeb MA et al. 2022 Saudi pharmaceutical journal
36210801 A genome-wide association study of plasma concentrations of warfarin enantiomers and metabolites in sub-Saharan black-African patients. Asiimwe IG et al. 2022 Frontiers in pharmacology
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post825+45319f0