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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs887829

Current Build 157

Released September 3, 2024

Organism
Homo sapiens
Position
chr2:233759924 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
C>A / C>G / C>T
Variation Type
SNV Single Nucleotide Variation
Frequency
T=0.327903 (115401/351936, ALFA)
T=0.355563 (94114/264690, TOPMED)
T=0.361387 (53812/148904, GnomAD_genomes) (+ 21 more)
T=0.35530 (27960/78694, PAGE_STUDY)
T=0.11297 (8749/77442, 38KJPN)
T=0.1243 (899/7234, Korea4K)
T=0.3579 (2292/6404, 1000G_30X)
T=0.3540 (1773/5008, 1000G)
T=0.3451 (1546/4480, Estonian)
T=0.3215 (1239/3854, ALSPAC)
T=0.3128 (1160/3708, TWINSUK)
T=0.1317 (386/2930, KOREAN)
T=0.3635 (687/1890, HapMap)
T=0.1299 (238/1832, Korea1K)
T=0.121 (95/788, PRJEB37584)
T=0.323 (202/626, Chileans)
T=0.322 (193/600, NorthernSweden)
C=0.377 (95/252, SGDP_PRJ)
T=0.319 (69/216, Qatari)
T=0.088 (19/216, Vietnamese)
T=0.292 (42/144, PharmGKB)
T=0.33 (13/40, GENOME_DK)
T=0.29 (10/34, Ancient Sardinia)
C=0.43 (12/28, Siberian)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
UGT1A10 : Intron Variant
UGT1A3 : Intron Variant
UGT1A4 : Intron Variant (+ 6 more)
UGT1A5 : Intron Variant
UGT1A6 : Intron Variant
UGT1A7 : Intron Variant
UGT1A8 : Intron Variant
UGT1A9 : Intron Variant
UGT1A1 : 2KB Upstream Variant
Publications
69 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315
Population Group Sample Size Ref Allele Alt Allele Ref HMOZ Alt HMOZ HTRZ HWEP
Total Global 351936 C=0.672097 T=0.327903 0.453975 0.109781 0.436244 10
European Sub 300524 C=0.671537 T=0.328463 0.451139 0.108065 0.440797 0
African Sub 11758 C=0.54822 T=0.45178 0.300902 0.204457 0.494642 0
African Others Sub 414 C=0.498 T=0.502 0.241546 0.246377 0.512077 0
African American Sub 11344 C=0.55007 T=0.44993 0.303068 0.202927 0.494006 0
Asian Sub 6970 C=0.8861 T=0.1139 0.785653 0.013486 0.200861 0
East Asian Sub 5000 C=0.8800 T=0.1200 0.774 0.014 0.212 0
Other Asian Sub 1970 C=0.9015 T=0.0985 0.815228 0.012183 0.172589 0
Latin American 1 Sub 1278 C=0.6847 T=0.3153 0.475743 0.106416 0.41784 0
Latin American 2 Sub 9380 C=0.6832 T=0.3168 0.46951 0.103198 0.427292 0
South Asian Sub 5236 C=0.5905 T=0.4095 0.354469 0.173415 0.472116 1
Other Sub 16790 C=0.69833 T=0.30167 0.494937 0.098273 0.40679 6


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
Allele Frequency Aggregator Total Global 351936 C=0.672097 T=0.327903
Allele Frequency Aggregator European Sub 300524 C=0.671537 T=0.328463
Allele Frequency Aggregator Other Sub 16790 C=0.69833 T=0.30167
Allele Frequency Aggregator African Sub 11758 C=0.54822 T=0.45178
Allele Frequency Aggregator Latin American 2 Sub 9380 C=0.6832 T=0.3168
Allele Frequency Aggregator Asian Sub 6970 C=0.8861 T=0.1139
Allele Frequency Aggregator South Asian Sub 5236 C=0.5905 T=0.4095
Allele Frequency Aggregator Latin American 1 Sub 1278 C=0.6847 T=0.3153
TopMed Global Study-wide 264690 C=0.644437 T=0.355563
gnomAD v4 - Genomes Global Study-wide 148904 C=0.638613 T=0.361387
gnomAD v4 - Genomes European Sub 78494 C=0.66566 T=0.33434
gnomAD v4 - Genomes African Sub 41388 C=0.55125 T=0.44875
gnomAD v4 - Genomes American Sub 15274 C=0.67605 T=0.32395
gnomAD v4 - Genomes East Asian Sub 5170 C=0.8741 T=0.1259
gnomAD v4 - Genomes South Asian Sub 4818 C=0.5905 T=0.4095
gnomAD v4 - Genomes Ashkenazi Jewish Sub 3466 C=0.6174 T=0.3826
gnomAD v4 - Genomes Middle Eastern sub 294 C=0.670 T=0.330
The PAGE Study Global Study-wide 78694 C=0.64470 T=0.35530
The PAGE Study AfricanAmerican Sub 32512 C=0.56287 T=0.43713
The PAGE Study Mexican Sub 10810 C=0.68353 T=0.31647
The PAGE Study Asian Sub 8318 C=0.8836 T=0.1164
The PAGE Study PuertoRican Sub 7916 C=0.6454 T=0.3546
The PAGE Study NativeHawaiian Sub 4532 C=0.7094 T=0.2906
The PAGE Study Cuban Sub 4230 C=0.6693 T=0.3307
The PAGE Study Dominican Sub 3828 C=0.6102 T=0.3898
The PAGE Study CentralAmerican Sub 2450 C=0.6686 T=0.3314
The PAGE Study SouthAmerican Sub 1982 C=0.6327 T=0.3673
The PAGE Study NativeAmerican Sub 1260 C=0.6532 T=0.3468
The PAGE Study SouthAsian Sub 856 C=0.571 T=0.429
38KJPN JAPANESE Study-wide 77442 C=0.88703 T=0.11297
Korean Genome Project 4K KOREAN Study-wide 7234 C=0.8757 T=0.1243
1000Genomes_30X Global Study-wide 6404 C=0.6421 T=0.3579
1000Genomes_30X African Sub 1786 C=0.5101 T=0.4899
1000Genomes_30X Europe Sub 1266 C=0.6991 T=0.3009
1000Genomes_30X South Asian Sub 1202 C=0.5641 T=0.4359
1000Genomes_30X East Asian Sub 1170 C=0.8718 T=0.1282
1000Genomes_30X American Sub 980 C=0.631 T=0.369
1000Genomes Global Study-wide 5008 C=0.6460 T=0.3540
1000Genomes African Sub 1322 C=0.5068 T=0.4932
1000Genomes East Asian Sub 1008 C=0.8700 T=0.1300
1000Genomes Europe Sub 1006 C=0.7018 T=0.2982
1000Genomes South Asian Sub 978 C=0.563 T=0.437
1000Genomes American Sub 694 C=0.621 T=0.379
Genetic variation in the Estonian population Estonian Study-wide 4480 C=0.6549 T=0.3451
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 C=0.6785 T=0.3215
UK 10K study - Twins TWIN COHORT Study-wide 3708 C=0.6872 T=0.3128
KOREAN population from KRGDB KOREAN Study-wide 2930 C=0.8683 T=0.1317
HapMap Global Study-wide 1890 C=0.6365 T=0.3635
HapMap American Sub 768 C=0.680 T=0.320
HapMap African Sub 692 C=0.490 T=0.510
HapMap Asian Sub 254 C=0.835 T=0.165
HapMap Europe Sub 176 C=0.739 T=0.261
Korean Genome Project KOREAN Study-wide 1832 C=0.8701 T=0.1299
CNV burdens in cranial meningiomas Global Study-wide 788 C=0.879 T=0.121
CNV burdens in cranial meningiomas CRM Sub 788 C=0.879 T=0.121
Chileans Chilean Study-wide 626 C=0.677 T=0.323
Northern Sweden ACPOP Study-wide 600 C=0.678 T=0.322
SGDP_PRJ Global Study-wide 252 C=0.377 T=0.623
Qatari Global Study-wide 216 C=0.681 T=0.319
A Vietnamese Genetic Variation Database Global Study-wide 216 C=0.912 T=0.088
PharmGKB Aggregated Global Study-wide 144 C=0.708 T=0.292
PharmGKB Aggregated PA130445541 Sub 144 C=0.708 T=0.292
The Danish reference pan genome Danish Study-wide 40 C=0.68 T=0.33
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 34 C=0.71 T=0.29
Siberian Global Study-wide 28 C=0.43 T=0.57
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 2 NC_000002.12:g.233759924C>A
GRCh38.p14 chr 2 NC_000002.12:g.233759924C>G
GRCh38.p14 chr 2 NC_000002.12:g.233759924C>T
GRCh37.p13 chr 2 NC_000002.11:g.234668570C>A
GRCh37.p13 chr 2 NC_000002.11:g.234668570C>G
GRCh37.p13 chr 2 NC_000002.11:g.234668570C>T
UGT1A RefSeqGene NG_002601.2:g.175181C>A
UGT1A RefSeqGene NG_002601.2:g.175181C>G
UGT1A RefSeqGene NG_002601.2:g.175181C>T
UGT1A1 RefSeqGene (LRG_733) NG_033238.1:g.4652C>A
UGT1A1 RefSeqGene (LRG_733) NG_033238.1:g.4652C>G
UGT1A1 RefSeqGene (LRG_733) NG_033238.1:g.4652C>T
LOC129660919 genomic region NG_157956.1:g.318C>A
LOC129660919 genomic region NG_157956.1:g.318C>G
LOC129660919 genomic region NG_157956.1:g.318C>T
Gene: UGT1A6, UDP glucuronosyltransferase family 1 member A6 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
UGT1A6 transcript variant 1 NM_001072.4:c.862-7110C>A N/A Intron Variant
UGT1A6 transcript variant 2 NM_205862.3:c.61-7110C>A N/A Intron Variant
Gene: UGT1A4, UDP glucuronosyltransferase family 1 member A4 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
UGT1A4 transcript NM_007120.3:c.868-7110C>A N/A Intron Variant
Gene: UGT1A10, UDP glucuronosyltransferase family 1 member A10 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
UGT1A10 transcript NM_019075.4:c.856-7110C>A N/A Intron Variant
Gene: UGT1A8, UDP glucuronosyltransferase family 1 member A8 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
UGT1A8 transcript NM_019076.5:c.856-7110C>A N/A Intron Variant
Gene: UGT1A7, UDP glucuronosyltransferase family 1 member A7 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
UGT1A7 transcript NM_019077.3:c.856-7110C>A N/A Intron Variant
Gene: UGT1A5, UDP glucuronosyltransferase family 1 member A5 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
UGT1A5 transcript NM_019078.2:c.868-7110C>A N/A Intron Variant
Gene: UGT1A3, UDP glucuronosyltransferase family 1 member A3 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
UGT1A3 transcript NM_019093.4:c.868-7110C>A N/A Intron Variant
Gene: UGT1A9, UDP glucuronosyltransferase family 1 member A9 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
UGT1A9 transcript NM_021027.3:c.856-7110C>A N/A Intron Variant
Gene: UGT1A1, UDP glucuronosyltransferase family 1 member A1 (plus strand) : 2KB Upstream Variant
Molecule type Change Amino acid[Codon] SO Term
UGT1A1 transcript NM_000463.3:c. N/A Upstream Transcript Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement C= A G T
GRCh38.p14 chr 2 NC_000002.12:g.233759924= NC_000002.12:g.233759924C>A NC_000002.12:g.233759924C>G NC_000002.12:g.233759924C>T
GRCh37.p13 chr 2 NC_000002.11:g.234668570= NC_000002.11:g.234668570C>A NC_000002.11:g.234668570C>G NC_000002.11:g.234668570C>T
UGT1A RefSeqGene NG_002601.2:g.175181= NG_002601.2:g.175181C>A NG_002601.2:g.175181C>G NG_002601.2:g.175181C>T
UGT1A1 RefSeqGene (LRG_733) NG_033238.1:g.4652= NG_033238.1:g.4652C>A NG_033238.1:g.4652C>G NG_033238.1:g.4652C>T
LOC129660919 genomic region NG_157956.1:g.318= NG_157956.1:g.318C>A NG_157956.1:g.318C>G NG_157956.1:g.318C>T
UGT1A6 transcript variant 1 NM_001072.3:c.862-7110= NM_001072.3:c.862-7110C>A NM_001072.3:c.862-7110C>G NM_001072.3:c.862-7110C>T
UGT1A6 transcript variant 1 NM_001072.4:c.862-7110= NM_001072.4:c.862-7110C>A NM_001072.4:c.862-7110C>G NM_001072.4:c.862-7110C>T
UGT1A4 transcript NM_007120.2:c.868-7110= NM_007120.2:c.868-7110C>A NM_007120.2:c.868-7110C>G NM_007120.2:c.868-7110C>T
UGT1A4 transcript NM_007120.3:c.868-7110= NM_007120.3:c.868-7110C>A NM_007120.3:c.868-7110C>G NM_007120.3:c.868-7110C>T
UGT1A10 transcript NM_019075.2:c.856-7110= NM_019075.2:c.856-7110C>A NM_019075.2:c.856-7110C>G NM_019075.2:c.856-7110C>T
UGT1A10 transcript NM_019075.4:c.856-7110= NM_019075.4:c.856-7110C>A NM_019075.4:c.856-7110C>G NM_019075.4:c.856-7110C>T
UGT1A8 transcript NM_019076.4:c.856-7110= NM_019076.4:c.856-7110C>A NM_019076.4:c.856-7110C>G NM_019076.4:c.856-7110C>T
UGT1A8 transcript NM_019076.5:c.856-7110= NM_019076.5:c.856-7110C>A NM_019076.5:c.856-7110C>G NM_019076.5:c.856-7110C>T
UGT1A7 transcript NM_019077.2:c.856-7110= NM_019077.2:c.856-7110C>A NM_019077.2:c.856-7110C>G NM_019077.2:c.856-7110C>T
UGT1A7 transcript NM_019077.3:c.856-7110= NM_019077.3:c.856-7110C>A NM_019077.3:c.856-7110C>G NM_019077.3:c.856-7110C>T
UGT1A5 transcript NM_019078.1:c.868-7110= NM_019078.1:c.868-7110C>A NM_019078.1:c.868-7110C>G NM_019078.1:c.868-7110C>T
UGT1A5 transcript NM_019078.2:c.868-7110= NM_019078.2:c.868-7110C>A NM_019078.2:c.868-7110C>G NM_019078.2:c.868-7110C>T
UGT1A3 transcript NM_019093.2:c.868-7110= NM_019093.2:c.868-7110C>A NM_019093.2:c.868-7110C>G NM_019093.2:c.868-7110C>T
UGT1A3 transcript NM_019093.4:c.868-7110= NM_019093.4:c.868-7110C>A NM_019093.4:c.868-7110C>G NM_019093.4:c.868-7110C>T
UGT1A9 transcript NM_021027.2:c.856-7110= NM_021027.2:c.856-7110C>A NM_021027.2:c.856-7110C>G NM_021027.2:c.856-7110C>T
UGT1A9 transcript NM_021027.3:c.856-7110= NM_021027.3:c.856-7110C>A NM_021027.3:c.856-7110C>G NM_021027.3:c.856-7110C>T
UGT1A6 transcript variant 2 NM_205862.1:c.61-7110= NM_205862.1:c.61-7110C>A NM_205862.1:c.61-7110C>G NM_205862.1:c.61-7110C>T
UGT1A6 transcript variant 2 NM_205862.3:c.61-7110= NM_205862.3:c.61-7110C>A NM_205862.3:c.61-7110C>G NM_205862.3:c.61-7110C>T
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

156 SubSNP, 24 Frequency submissions
No Submitter Submission ID Date (Build)
1 TSC-CSHL ss1315995 Oct 05, 2000 (86)
2 TSC-CSHL ss5169686 Oct 08, 2002 (108)
3 WUGSC_SSAHASNP ss14494210 Dec 05, 2003 (119)
4 CSHL-HAPMAP ss17659924 Feb 27, 2004 (120)
5 SSAHASNP ss21574509 Apr 05, 2004 (123)
6 ABI ss44259633 Mar 13, 2006 (126)
7 EGP_SNPS ss50393212 Mar 14, 2006 (126)
8 STEJUSTINE-REGGEN ss51854787 Mar 16, 2006 (126)
9 AFFY ss66331626 Nov 30, 2006 (127)
10 PHARMGKB_PAAR-UCHI ss69369239 May 17, 2007 (127)
11 ILLUMINA ss75086159 Dec 06, 2007 (129)
12 AFFY ss76028792 Dec 06, 2007 (129)
13 HGSV ss78444692 Dec 06, 2007 (129)
14 KRIBB_YJKIM ss81442937 Dec 16, 2007 (130)
15 HUMANGENOME_JCVI ss97132036 Feb 04, 2009 (130)
16 1000GENOMES ss110965202 Jan 25, 2009 (130)
17 1000GENOMES ss111825012 Jan 25, 2009 (130)
18 ILLUMINA-UK ss118123012 Feb 14, 2009 (130)
19 ENSEMBL ss132931186 Dec 01, 2009 (131)
20 ILLUMINA ss154477894 Dec 01, 2009 (131)
21 ILLUMINA ss159652323 Dec 01, 2009 (131)
22 ILLUMINA ss160963094 Dec 01, 2009 (131)
23 AFFY ss170602199 Jul 04, 2010 (132)
24 ILLUMINA ss174767711 Jul 04, 2010 (132)
25 BUSHMAN ss201895631 Jul 04, 2010 (132)
26 BCM-HGSC-SUB ss205632455 Jul 04, 2010 (132)
27 1000GENOMES ss219881097 Jul 14, 2010 (132)
28 1000GENOMES ss231635572 Jul 14, 2010 (132)
29 1000GENOMES ss239083133 Jul 15, 2010 (132)
30 GMI ss276944164 May 04, 2012 (137)
31 PJP ss292510946 May 09, 2011 (134)
32 ILLUMINA ss410955790 Sep 17, 2011 (135)
33 ILLUMINA ss481826310 May 04, 2012 (137)
34 ILLUMINA ss481858816 May 04, 2012 (137)
35 ILLUMINA ss482818061 Sep 08, 2015 (146)
36 ILLUMINA ss485707682 May 04, 2012 (137)
37 EXOME_CHIP ss491333410 May 04, 2012 (137)
38 ILLUMINA ss537571115 Sep 08, 2015 (146)
39 SSMP ss649966236 Apr 25, 2013 (138)
40 ILLUMINA ss779002278 Sep 08, 2015 (146)
41 ILLUMINA ss780687159 Sep 08, 2015 (146)
42 ILLUMINA ss783299449 Sep 08, 2015 (146)
43 ILLUMINA ss783360702 Sep 08, 2015 (146)
44 ILLUMINA ss784251789 Sep 08, 2015 (146)
45 ILLUMINA ss832560786 Sep 08, 2015 (146)
46 ILLUMINA ss833163131 Jul 13, 2019 (153)
47 ILLUMINA ss834464654 Sep 08, 2015 (146)
48 EVA-GONL ss978088575 Aug 21, 2014 (142)
49 JMKIDD_LAB ss1070036231 Aug 21, 2014 (142)
50 1000GENOMES ss1302134496 Aug 21, 2014 (142)
51 DDI ss1428950089 Apr 01, 2015 (144)
52 EVA_GENOME_DK ss1579373554 Apr 01, 2015 (144)
53 EVA_DECODE ss1587548679 Apr 01, 2015 (144)
54 EVA_UK10K_ALSPAC ss1606057639 Apr 01, 2015 (144)
55 EVA_UK10K_TWINSUK ss1649051672 Apr 01, 2015 (144)
56 EVA_SVP ss1712539934 Apr 01, 2015 (144)
57 ILLUMINA ss1752345218 Sep 08, 2015 (146)
58 ILLUMINA ss1752345219 Sep 08, 2015 (146)
59 HAMMER_LAB ss1798566758 Sep 08, 2015 (146)
60 ILLUMINA ss1917761544 Feb 12, 2016 (147)
61 WEILL_CORNELL_DGM ss1921336161 Feb 12, 2016 (147)
62 ILLUMINA ss1946070030 Feb 12, 2016 (147)
63 ILLUMINA ss1958518576 Feb 12, 2016 (147)
64 JJLAB ss2021216395 Sep 14, 2016 (149)
65 ILLUMINA ss2094809166 Dec 20, 2016 (150)
66 ILLUMINA ss2095111600 Dec 20, 2016 (150)
67 USC_VALOUEV ss2149282513 Dec 20, 2016 (150)
68 HUMAN_LONGEVITY ss2240160658 Dec 20, 2016 (150)
69 SYSTEMSBIOZJU ss2625108462 Nov 08, 2017 (151)
70 ILLUMINA ss2633755412 Nov 08, 2017 (151)
71 ILLUMINA ss2633755413 Nov 08, 2017 (151)
72 GRF ss2703935215 Nov 08, 2017 (151)
73 ILLUMINA ss2710928943 Nov 08, 2017 (151)
74 ILLUMINA ss2710928944 Nov 08, 2017 (151)
75 GNOMAD ss2787712026 Nov 08, 2017 (151)
76 AFFY ss2985203948 Nov 08, 2017 (151)
77 AFFY ss2985825270 Nov 08, 2017 (151)
78 SWEGEN ss2991558423 Nov 08, 2017 (151)
79 ILLUMINA ss3022083116 Nov 08, 2017 (151)
80 BIOINF_KMB_FNS_UNIBA ss3024368349 Nov 08, 2017 (151)
81 CSHL ss3344798535 Nov 08, 2017 (151)
82 ILLUMINA ss3628314198 Oct 11, 2018 (152)
83 ILLUMINA ss3628314199 Oct 11, 2018 (152)
84 ILLUMINA ss3631714589 Oct 11, 2018 (152)
85 ILLUMINA ss3633951936 Oct 11, 2018 (152)
86 ILLUMINA ss3634818215 Oct 11, 2018 (152)
87 ILLUMINA ss3634818216 Oct 11, 2018 (152)
88 ILLUMINA ss3635637289 Oct 11, 2018 (152)
89 ILLUMINA ss3636508286 Oct 11, 2018 (152)
90 ILLUMINA ss3637389324 Oct 11, 2018 (152)
91 ILLUMINA ss3638325646 Oct 11, 2018 (152)
92 ILLUMINA ss3640525514 Oct 11, 2018 (152)
93 ILLUMINA ss3640525515 Oct 11, 2018 (152)
94 ILLUMINA ss3641122392 Oct 11, 2018 (152)
95 ILLUMINA ss3641418537 Oct 11, 2018 (152)
96 ILLUMINA ss3643289839 Oct 11, 2018 (152)
97 ILLUMINA ss3644772734 Oct 11, 2018 (152)
98 URBANLAB ss3647302824 Oct 11, 2018 (152)
99 ILLUMINA ss3652535920 Oct 11, 2018 (152)
100 ILLUMINA ss3652535921 Oct 11, 2018 (152)
101 ILLUMINA ss3653971967 Oct 11, 2018 (152)
102 EGCUT_WGS ss3659455948 Jul 13, 2019 (153)
103 EVA_DECODE ss3706266231 Jul 13, 2019 (153)
104 ILLUMINA ss3725884821 Jul 13, 2019 (153)
105 ACPOP ss3729481016 Jul 13, 2019 (153)
106 ILLUMINA ss3744488886 Jul 13, 2019 (153)
107 ILLUMINA ss3745118104 Jul 13, 2019 (153)
108 ILLUMINA ss3745118105 Jul 13, 2019 (153)
109 EVA ss3758234696 Jul 13, 2019 (153)
110 PAGE_CC ss3770996297 Jul 13, 2019 (153)
111 ILLUMINA ss3772614479 Jul 13, 2019 (153)
112 ILLUMINA ss3772614480 Jul 13, 2019 (153)
113 KHV_HUMAN_GENOMES ss3802597182 Jul 13, 2019 (153)
114 EVA ss3827569841 Apr 25, 2020 (154)
115 EVA ss3837205320 Apr 25, 2020 (154)
116 EVA ss3842627995 Apr 25, 2020 (154)
117 SGDP_PRJ ss3854854074 Apr 25, 2020 (154)
118 KRGDB ss3900603208 Apr 25, 2020 (154)
119 KOGIC ss3950335494 Apr 25, 2020 (154)
120 EVA ss3984499944 Apr 26, 2021 (155)
121 EVA ss3984961493 Apr 26, 2021 (155)
122 EVA ss4017055751 Apr 26, 2021 (155)
123 TOPMED ss4548833302 Apr 26, 2021 (155)
124 TOMMO_GENOMICS ss6019041114 Oct 30, 2024 (157)
125 EVA ss6289038307 Oct 30, 2024 (157)
126 EVA ss6321885007 Oct 30, 2024 (157)
127 EVA ss6322167472 Oct 30, 2024 (157)
128 EVA ss6323673394 Oct 30, 2024 (157)
129 EVA ss6329932039 Oct 30, 2024 (157)
130 YEGNASUBRAMANIAN_LAB ss6336182597 Oct 30, 2024 (157)
131 EVA ss6349546496 Oct 30, 2024 (157)
132 EVA ss6349997699 Oct 30, 2024 (157)
133 KOGIC ss6358689863 Oct 30, 2024 (157)
134 GNOMAD ss6574549840 Oct 30, 2024 (157)
135 TOMMO_GENOMICS ss8157056096 Oct 30, 2024 (157)
136 1000G_HIGH_COVERAGE ss8252463046 Oct 30, 2024 (157)
137 EVA ss8314817565 Oct 30, 2024 (157)
138 HUGCELL_USP ss8452030957 Oct 30, 2024 (157)
139 EVA ss8506837146 Oct 30, 2024 (157)
140 1000G_HIGH_COVERAGE ss8530019275 Oct 30, 2024 (157)
141 SANFORD_IMAGENETICS ss8624475465 Oct 30, 2024 (157)
142 SANFORD_IMAGENETICS ss8631198234 Oct 30, 2024 (157)
143 TOMMO_GENOMICS ss8688107864 Oct 30, 2024 (157)
144 EVA ss8799401927 Oct 30, 2024 (157)
145 EVA ss8799563827 Oct 30, 2024 (157)
146 YY_MCH ss8803328105 Oct 30, 2024 (157)
147 EVA ss8821760177 Oct 30, 2024 (157)
148 EVA ss8847207755 Oct 30, 2024 (157)
149 EVA ss8847907898 Oct 30, 2024 (157)
150 EVA ss8853001639 Oct 30, 2024 (157)
151 EVA ss8935201195 Oct 30, 2024 (157)
152 EVA ss8957463878 Oct 30, 2024 (157)
153 EVA ss8979604197 Oct 30, 2024 (157)
154 EVA ss8981875239 Oct 30, 2024 (157)
155 EVA ss8981875240 Oct 30, 2024 (157)
156 EVA ss8982417359 Oct 30, 2024 (157)
157 1000Genomes NC_000002.11 - 234668570 Oct 11, 2018 (152)
158 1000Genomes_30X NC_000002.12 - 233759924 Oct 30, 2024 (157)
159 The Avon Longitudinal Study of Parents and Children NC_000002.11 - 234668570 Oct 11, 2018 (152)
160 Chileans NC_000002.11 - 234668570 Apr 25, 2020 (154)
161 Genetic variation in the Estonian population NC_000002.11 - 234668570 Oct 11, 2018 (152)
162 The Danish reference pan genome NC_000002.11 - 234668570 Apr 25, 2020 (154)
163 gnomAD v4 - Genomes NC_000002.12 - 233759924 Oct 30, 2024 (157)
164 HapMap NC_000002.12 - 233759924 Apr 25, 2020 (154)
165 KOREAN population from KRGDB NC_000002.11 - 234668570 Apr 25, 2020 (154)
166 Korean Genome Project NC_000002.12 - 233759924 Apr 25, 2020 (154)
167 Korean Genome Project 4K NC_000002.12 - 233759924 Oct 30, 2024 (157)
168 Northern Sweden NC_000002.11 - 234668570 Jul 13, 2019 (153)
169 The PAGE Study NC_000002.12 - 233759924 Jul 13, 2019 (153)
170 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000002.11 - 234668570 Apr 26, 2021 (155)
171 CNV burdens in cranial meningiomas NC_000002.11 - 234668570 Apr 26, 2021 (155)
172 PharmGKB Aggregated NC_000002.12 - 233759924 Apr 25, 2020 (154)
173 Qatari NC_000002.11 - 234668570 Apr 25, 2020 (154)
174 SGDP_PRJ NC_000002.11 - 234668570 Apr 25, 2020 (154)
175 Siberian NC_000002.11 - 234668570 Apr 25, 2020 (154)
176 38KJPN NC_000002.12 - 233759924 Oct 30, 2024 (157)
177 TopMed NC_000002.12 - 233759924 Apr 26, 2021 (155)
178 UK 10K study - Twins NC_000002.11 - 234668570 Oct 11, 2018 (152)
179 A Vietnamese Genetic Variation Database NC_000002.11 - 234668570 Jul 13, 2019 (153)
180 ALFA NC_000002.12 - 233759924 Oct 30, 2024 (157)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs12990609 Sep 24, 2004 (123)
rs34790730 May 23, 2006 (127)
rs36207722 Oct 25, 2006 (127)
rs61315639 Feb 26, 2009 (130)
rs386619532 Aug 21, 2014 (142)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss6349546496 NC_000002.11:234668569:C:A NC_000002.12:233759923:C:A
ss6349546496 NC_000002.11:234668569:C:G NC_000002.12:233759923:C:G
ss78444692 NC_000002.9:234450569:C:T NC_000002.12:233759923:C:T (self)
ss110965202, ss111825012, ss118123012, ss201895631, ss205632455, ss276944164, ss292510946, ss481826310, ss1587548679, ss1712539934, ss3643289839 NC_000002.10:234333308:C:T NC_000002.12:233759923:C:T (self)
13257636, 7342913, 245939, 5194196, 5538493, 7780602, 2765881, 187420, 49284, 3378091, 6871054, 1798867, 7342913, 1594072, ss219881097, ss231635572, ss239083133, ss481858816, ss482818061, ss485707682, ss491333410, ss537571115, ss649966236, ss779002278, ss780687159, ss783299449, ss783360702, ss784251789, ss832560786, ss833163131, ss834464654, ss978088575, ss1070036231, ss1302134496, ss1428950089, ss1579373554, ss1606057639, ss1649051672, ss1752345218, ss1752345219, ss1798566758, ss1917761544, ss1921336161, ss1946070030, ss1958518576, ss2021216395, ss2094809166, ss2095111600, ss2149282513, ss2625108462, ss2633755412, ss2633755413, ss2703935215, ss2710928943, ss2710928944, ss2787712026, ss2985203948, ss2985825270, ss2991558423, ss3022083116, ss3344798535, ss3628314198, ss3628314199, ss3631714589, ss3633951936, ss3634818215, ss3634818216, ss3635637289, ss3636508286, ss3637389324, ss3638325646, ss3640525514, ss3640525515, ss3641122392, ss3641418537, ss3644772734, ss3652535920, ss3652535921, ss3653971967, ss3659455948, ss3729481016, ss3744488886, ss3745118104, ss3745118105, ss3758234696, ss3772614479, ss3772614480, ss3827569841, ss3837205320, ss3854854074, ss3900603208, ss3984499944, ss3984961493, ss4017055751, ss6289038307, ss6322167472, ss6323673394, ss6329932039, ss6336182597, ss8157056096, ss8314817565, ss8506837146, ss8624475465, ss8631198234, ss8799401927, ss8799563827, ss8821760177, ss8847207755, ss8847907898, ss8957463878, ss8979604197, ss8981875239, ss8981875240, ss8982417359 NC_000002.11:234668569:C:T NC_000002.12:233759923:C:T (self)
17545210, 101028869, 2035235, 6713495, 8541761, 217766, 6976, 36416934, 352656181, 6739257510, ss2240160658, ss3024368349, ss3647302824, ss3706266231, ss3725884821, ss3770996297, ss3802597182, ss3842627995, ss3950335494, ss4548833302, ss6019041114, ss6321885007, ss6349997699, ss6358689863, ss6574549840, ss8252463046, ss8452030957, ss8530019275, ss8688107864, ss8803328105, ss8853001639, ss8935201195 NC_000002.12:233759923:C:T NC_000002.12:233759923:C:T (self)
ss14494210, ss17659924, ss21574509 NT_005120.14:599103:C:T NC_000002.12:233759923:C:T (self)
ss1315995, ss5169686, ss44259633, ss50393212, ss51854787, ss66331626, ss69369239, ss75086159, ss76028792, ss81442937, ss97132036, ss132931186, ss154477894, ss159652323, ss160963094, ss170602199, ss174767711, ss410955790 NT_005120.16:614828:C:T NC_000002.12:233759923:C:T (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

69 citations for rs887829
PMID Title Author Year Journal
17424838 [Genetic polymorphisms of MPO, NQO1, GSTP1, UGT1A6 associated with susceptibility of chronic benzene poisoning]. Sun P et al. 2007 Wei sheng yan jiu = Journal of hygiene research
18349273 UGT1A1 genetic polymorphisms, endogenous estrogen exposure, soy food intake, and endometrial cancer risk. Deming SL et al. 2008 Cancer epidemiology, biomarkers & prevention
19238116 Common variants of four bilirubin metabolism genes and their association with serum bilirubin and coronary artery disease in Chinese Han population. Lin R et al. 2009 Pharmacogenetics and genomics
19267064 [Relationship between genetic polymorphisms of phase I and phase II metabolizing enzymes and DNA damage of workers exposed to vinyl chloride monomer]. Ji F et al. 2009 Wei sheng yan jiu = Journal of hygiene research
19414484 Genome-wide association meta-analysis for total serum bilirubin levels. Johnson AD et al. 2009 Human molecular genetics
19419973 Common variants in the SLCO1B3 locus are associated with bilirubin levels and unconjugated hyperbilirubinemia. Sanna S et al. 2009 Human molecular genetics
19482841 Serum bilirubin levels on ICU admission are associated with ARDS development and mortality in sepsis. Zhai R et al. 2009 Thorax
19721433 Genome-wide pharmacogenomic analysis of response to treatment with antipsychotics. McClay JL et al. 2011 Molecular psychiatry
20639394 Genome-wide association of serum bilirubin levels in Korean population. Kang TW et al. 2010 Human molecular genetics
21309756 Prevalence of clinically relevant UGT1A alleles and haplotypes in African populations. Horsfall LJ et al. 2011 Annals of human genetics
21712189 Analysis of pharmacogenetic traits in two distinct South African populations. Ikediobi O et al. 2011 Human genomics
21886157 Human metabolic individuality in biomedical and pharmaceutical research. Suhre K et al. 2011 Nature
22085899 UGT1A1 is a major locus influencing bilirubin levels in African Americans. Chen G et al. 2012 European journal of human genetics
22228101 Mapping of the UGT1A locus identifies an uncommon coding variant that affects mRNA expression and protects from bladder cancer. Tang W et al. 2012 Human molecular genetics
22511988 A genome-wide association study identifies UGT1A1 as a regulator of serum cell-free DNA in young adults: The Cardiovascular Risk in Young Finns Study. Jylhävä J et al. 2012 PloS one
22558097 A genome-wide association study of total bilirubin and cholelithiasis risk in sickle cell anemia. Milton JN et al. 2012 PloS one
22888291 Genetic variants and haplotypes of the UGT1A9, 1A7 and 1A1 genes in Chinese Han. Zhang X et al. 2012 Genetics and molecular biology
22992668 Pharmacogenomics knowledge for personalized medicine. Whirl-Carrillo M et al. 2012 Clinical pharmacology and therapeutics
23092954 SHAVE: shrinkage estimator measured for multiple visits increases power in GWAS of quantitative traits. Meirelles OD et al. 2013 European journal of human genetics
23642732 Association of SNPs in the UGT1A gene cluster with total bilirubin and mortality in the Diabetes Heart Study. Cox AJ et al. 2013 Atherosclerosis
24270849 Systematic comparison of phenome-wide association study of electronic medical record data and genome-wide association study data. Denny JC et al. 2013 Nature biotechnology
24532860 Case-Control Genome-wide Joint Association Study Using Semiparametric Empirical Model and Approximate Bayes Factor. Xu J et al. 2013 Journal of statistical computation and simulation
24557078 Genomewide association study of atazanavir pharmacokinetics and hyperbilirubinemia in AIDS Clinical Trials Group protocol A5202. Johnson DH et al. 2014 Pharmacogenetics and genomics
24625756 Genetic determinants influencing human serum metabolome among African Americans. Yu B et al. 2014 PLoS genetics
24944790 Screening for 392 polymorphisms in 141 pharmacogenes. Kim JY et al. 2014 Biomedical reports
25110414 Pharmacogenetics research on chemotherapy resistance in colorectal cancer over the last 20 years. Panczyk M et al. 2014 World journal of gastroenterology
25262300 Quantitative trait analysis of polymorphisms in two bilirubin metabolism enzymes to physiologic bilirubin levels in Chinese newborns. Zhou Y et al. 2014 The Journal of pediatrics
25348619 Influence of single-nucleotide polymorphisms on deferasirox C trough levels and effectiveness. Cusato J et al. 2015 The pharmacogenomics journal
25478904 Functional Study of Haplotypes in UGT1A1 Promoter to Find a Novel Genetic Variant Leading to Reduced Gene Expression. Shin HJ et al. 2015 Therapeutic drug monitoring
25884002 Phenome-wide Association Study Relating Pretreatment Laboratory Parameters With Human Genetic Variants in AIDS Clinical Trials Group Protocols. Moore CB et al. 2015 Open forum infectious diseases
26039129 Exome-Wide Association Study Identifies New Low-Frequency and Rare UGT1A1 Coding Variants and UGT1A6 Coding Variants Influencing Serum Bilirubin in Elderly Subjects: A Strobe Compliant Article. Oussalah A et al. 2015 Medicine
26180834 Screening for UGT1A1 Genotype in Study A5257 Would Have Markedly Reduced Premature Discontinuation of Atazanavir for Hyperbilirubinemia. Vardhanabhuti S et al. 2015 Open forum infectious diseases
26223945 Influence of UDP-Glucuronosyltransferase Polymorphisms on Stable Warfarin Doses in Patients with Mechanical Cardiac Valves. An SH et al. 2015 Cardiovascular therapeutics
26413716 A GWAS Study on Liver Function Test Using eMERGE Network Participants. Namjou B et al. 2015 PloS one
26417955 Clinical Pharmacogenetics Implementation Consortium (CPIC) Guideline for UGT1A1 and Atazanavir Prescribing. Gammal RS et al. 2016 Clinical pharmacology and therapeutics
26628212 Serum bilirubin concentration is modified by UGT1A1 haplotypes and influences risk of type-2 diabetes in the Norfolk Island genetic isolate. Benton MC et al. 2015 BMC genetics
27043265 Role of pharmacogenetics on deferasirox AUC and efficacy. Cusato J et al. 2016 Pharmacogenomics
27110117 Clinically relevant genetic variants of drug-metabolizing enzyme and transporter genes detected in Thai children and adolescents with autism spectrum disorder. Medhasi S et al. 2016 Neuropsychiatric disease and treatment
28346059 Deferasirox pharmacogenetic influence on pharmacokinetic, efficacy and toxicity in a cohort of pediatric patients. Allegra S et al. 2017 Pharmacogenomics
28550460 The impact of non-genetic and genetic factors on a stable warfarin dose in Thai patients. Wattanachai N et al. 2017 European journal of clinical pharmacology
28746172 A genetic variant in the catechol-O-methyl transferase (COMT) gene is related to age-dependent differences in the therapeutic effect of calcium-channel blockers. Xu J et al. 2017 Medicine
29117017 Race/ethnicity difference in the pharmacogenetics of bilirubin-related atazanavir discontinuation. Leger P et al. 2018 Pharmacogenetics and genomics
29193749 Clinical Implementation of Pharmacogenetic Testing in a Hospital of the Spanish National Health System: Strategy and Experience Over 3 Years. Borobia AM et al. 2018 Clinical and translational science
30093869 Biological Predictors of Clozapine Response: A Systematic Review. Samanaite R et al. 2018 Frontiers in psychiatry
30421550 Prolonged central apnoea after intravenous morphine administration in a 12-year-old male with a UGT1A1 loss-of-function polymorphism. Toce MS et al. 2019 British journal of clinical pharmacology
30621171 Genome-Wide Association Study (GWAS) on Bilirubin Concentrations in Subjects with Metabolic Syndrome: Sex-Specific GWAS Analysis and Gene-Diet Interactions in a Mediterranean Population. Coltell O et al. 2019 Nutrients
31019283 Secondary actionable findings identified by exome sequencing: expected impact on the organisation of care from the study of 700 consecutive tests. Thauvin-Robinet C et al. 2019 European journal of human genetics
32128760 A Genome-wide Association Study of Circulating Levels of Atorvastatin and Its Major Metabolites. Turner RM et al. 2020 Clinical pharmacology and therapeutics
32855344 Genetically raised serum bilirubin levels and lung cancer: a cohort study and Mendelian randomisation using UK Biobank. Horsfall LJ et al. 2020 Thorax
32930952 Effect of Genetic Polymorphisms on the Pharmacokinetics of Deferasirox in Healthy Chinese Subjects and an Artificial Neural Networks Model for Pharmacokinetic Prediction. Chen J et al. 2020 European journal of drug metabolism and pharmacokinetics
32936528 Important Pharmacogenetic Information for Drugs Prescribed During the SARS-CoV-2 Infection (COVID-19). Zubiaur P et al. 2020 Clinical and translational science
33110249 Population impact of pharmacogenetic tests in admixed populations across the Americas. Suarez-Kurtz G et al. 2021 The pharmacogenomics journal
33278020 Metabolic Effects of Aripiprazole and Olanzapine Multiple-Dose Treatment in a Randomised Crossover Clinical Trial in Healthy Volunteers: Association with Pharmacogenetics. Koller D et al. 2021 Advances in therapy
33519226 Genetic Diversity of Drug-Related Genes in Native Americans of the Brazilian Amazon. Fernandes MR et al. 2021 Pharmacogenomics and personalized medicine
33779967 Pharmacokinetics of Eltrombopag in Healthy Chinese Subjects and Effect of Sex and Genetic Polymorphism on its Pharmacokinetic and Pharmacodynamic Variability. Chen J et al. 2021 European journal of drug metabolism and pharmacokinetics
33805706 SLCO1B1 Phenotype and CYP3A5 Polymorphism Significantly Affect Atorvastatin Bioavailability. Zubiaur P et al. 2021 Journal of personalized medicine
33995083 Dexketoprofen Pharmacokinetics is not Significantly Altered by Genetic Polymorphism. Mejía-Abril G et al. 2021 Frontiers in pharmacology
34093191 Pharmacogenetic Associations Between Atazanavir/UGT1A1*28 and Efavirenz/rs3745274 (CYP2B6) Account for Specific Adverse Reactions in Chilean Patients Undergoing Antiretroviral Therapy. Poblete D et al. 2021 Frontiers in pharmacology
34117260 A UGT1A1 variant is associated with serum total bilirubin levels, which are causal for hypertension in African-ancestry individuals. Chen G et al. 2021 NPJ genomic medicine
34621706 Comprehensive analysis of important pharmacogenes in Koreans using the DMET™ platform. Kim B et al. 2021 Translational and clinical pharmacology
34690761 Effects of Cytochrome P450 and Transporter Polymorphisms on the Bioavailability and Safety of Dutasteride and Tamsulosin. Villapalos-García G et al. 2021 Frontiers in pharmacology
34703007 Integration of DNA sequencing with population pharmacokinetics to improve the prediction of irinotecan exposure in cancer patients. Karas S et al. 2022 British journal of cancer
34852805 Ensemble learning for the early prediction of neonatal jaundice with genetic features. Deng H et al. 2021 BMC medical informatics and decision making
35326157 Genetic Variations on Redox Control in Cardiometabolic Diseases: The Role of Nrf2. Zazueta C et al. 2022 Antioxidants (Basel, Switzerland)
35646073 SLC4A4, FRAS1, and SULT1A1 Genetic Variations Associated With Dabigatran Metabolism in a Healthy Chinese Population. Xie Q et al. 2022 Frontiers in genetics
35745658 Will the Use of Pharmacogenetics Improve Treatment Efficiency in COVID-19? Franczyk B et al. 2022 Pharmaceuticals (Basel, Switzerland)
35866816 Impact of VKORC1, CYP2C9, CYP1A2, UGT1A1, and GGCX polymorphisms on warfarin maintenance dose: Exploring a new algorithm in South Chinese patients accept mechanical heart valve replacement. Li J et al. 2022 Medicine
36032496 Association of MTHFR gene polymorphism C677T (rs1801133) studies with early primary knee osteoarthritis in a South Indian population: a hospital-based study. Poornima S et al. 2022 African health sciences
36065758 CYP2C8*3 and *4 define CYP2C8 phenotype: An approach with the substrate cinitapride. Campodónico DM et al. 2022 Clinical and translational science
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post825+45319f0