dbSNP Short Genetic Variations
Welcome to the Reference SNP (rs) Report
All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.
Reference SNP (rs) Report
This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.
rs2297595
Current Build 157
Released September 3, 2024
- Organism
- Homo sapiens
- Position
-
chr1:97699535 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
- Alleles
- T>A / T>C
- Variation Type
- SNV Single Nucleotide Variation
- Frequency
-
C=0.0906999 (127026/1400508, GnomAD_exomes)C=0.091082 (35755/392558, ALFA)C=0.068990 (18261/264690, TOPMED) (+ 28 more)
- Clinical Significance
- Reported in ClinVar
- Gene : Consequence
- DPYD : Missense Variant
- Publications
- 28 citations
- Genomic View
- See rs on genome
ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.
Population | Group | Sample Size | Ref Allele | Alt Allele | Ref HMOZ | Alt HMOZ | HTRZ | HWEP |
---|---|---|---|---|---|---|---|---|
Total | Global | 392558 | T=0.908918 | C=0.091082 | 0.827108 | 0.009273 | 0.163619 | 15 |
European | Sub | 331132 | T=0.902673 | C=0.097327 | 0.815506 | 0.010159 | 0.174335 | 6 |
African | Sub | 16548 | T=0.96568 | C=0.03432 | 0.932681 | 0.001329 | 0.06599 | 0 |
African Others | Sub | 594 | T=0.978 | C=0.022 | 0.959596 | 0.003367 | 0.037037 | 3 |
African American | Sub | 15954 | T=0.96521 | C=0.03479 | 0.931679 | 0.001254 | 0.067068 | 0 |
Asian | Sub | 6978 | T=0.9857 | C=0.0143 | 0.971338 | 0.0 | 0.028662 | 0 |
East Asian | Sub | 5010 | T=0.9860 | C=0.0140 | 0.972056 | 0.0 | 0.027944 | 0 |
Other Asian | Sub | 1968 | T=0.9848 | C=0.0152 | 0.969512 | 0.0 | 0.030488 | 0 |
Latin American 1 | Sub | 1488 | T=0.9227 | C=0.0773 | 0.849462 | 0.004032 | 0.146505 | 0 |
Latin American 2 | Sub | 7240 | T=0.9593 | C=0.0407 | 0.918785 | 0.000276 | 0.080939 | 3 |
South Asian | Sub | 5226 | T=0.9064 | C=0.0936 | 0.823957 | 0.011098 | 0.164945 | 1 |
Other | Sub | 23946 | T=0.91815 | C=0.08185 | 0.844149 | 0.007851 | 0.148 | 2 |
Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").
DownloadStudy | Population | Group | Sample Size | Ref Allele | Alt Allele |
---|---|---|---|---|---|
gnomAD v4 - Exomes | Global | Study-wide | 1400508 | T=0.9093001 | C=0.0906999 |
gnomAD v4 - Exomes | European | Sub | 1164572 | T=0.9030648 | C=0.0969352 |
gnomAD v4 - Exomes | South Asian | Sub | 86228 | T=0.90998 | C=0.09002 |
gnomAD v4 - Exomes | American | Sub | 44718 | T=0.96125 | C=0.03875 |
gnomAD v4 - Exomes | East Asian | Sub | 39678 | T=0.98211 | C=0.01789 |
gnomAD v4 - Exomes | African | Sub | 33442 | T=0.96744 | C=0.03256 |
gnomAD v4 - Exomes | Ashkenazi Jewish | Sub | 26112 | T=0.92333 | C=0.07667 |
gnomAD v4 - Exomes | Middle Eastern | sub | 5758 | T=0.8538 | C=0.1462 |
Allele Frequency Aggregator | Total | Global | 392558 | T=0.908918 | C=0.091082 |
Allele Frequency Aggregator | European | Sub | 331132 | T=0.902673 | C=0.097327 |
Allele Frequency Aggregator | Other | Sub | 23946 | T=0.91815 | C=0.08185 |
Allele Frequency Aggregator | African | Sub | 16548 | T=0.96568 | C=0.03432 |
Allele Frequency Aggregator | Latin American 2 | Sub | 7240 | T=0.9593 | C=0.0407 |
Allele Frequency Aggregator | Asian | Sub | 6978 | T=0.9857 | C=0.0143 |
Allele Frequency Aggregator | South Asian | Sub | 5226 | T=0.9064 | C=0.0936 |
Allele Frequency Aggregator | Latin American 1 | Sub | 1488 | T=0.9227 | C=0.0773 |
TopMed | Global | Study-wide | 264690 | T=0.931010 | C=0.068990 |
gnomAD v4 - Genomes | Global | Study-wide | 149094 | T=0.920111 | C=0.079889 |
gnomAD v4 - Genomes | European | Sub | 78536 | T=0.88888 | C=0.11112 |
gnomAD v4 - Genomes | African | Sub | 41540 | T=0.96608 | C=0.03392 |
gnomAD v4 - Genomes | American | Sub | 15252 | T=0.93352 | C=0.06648 |
gnomAD v4 - Genomes | East Asian | Sub | 5182 | T=0.9838 | C=0.0162 |
gnomAD v4 - Genomes | South Asian | Sub | 4822 | T=0.9268 | C=0.0732 |
gnomAD v4 - Genomes | Ashkenazi Jewish | Sub | 3468 | T=0.9158 | C=0.0842 |
gnomAD v4 - Genomes | Middle Eastern | sub | 294 | T=0.891 | C=0.109 |
ExAC | Global | Study-wide | 121228 | T=0.913634 | C=0.086366 |
ExAC | Europe | Sub | 73272 | T=0.89018 | C=0.10982 |
ExAC | Asian | Sub | 25150 | T=0.93718 | C=0.06282 |
ExAC | American | Sub | 11564 | T=0.96671 | C=0.03329 |
ExAC | African | Sub | 10334 | T=0.96400 | C=0.03600 |
ExAC | Other | Sub | 908 | T=0.905 | C=0.095 |
The PAGE Study | Global | Study-wide | 78698 | T=0.95440 | C=0.04560 |
The PAGE Study | AfricanAmerican | Sub | 32514 | T=0.96402 | C=0.03598 |
The PAGE Study | Mexican | Sub | 10808 | T=0.95633 | C=0.04367 |
The PAGE Study | Asian | Sub | 8318 | T=0.9805 | C=0.0195 |
The PAGE Study | PuertoRican | Sub | 7918 | T=0.9116 | C=0.0884 |
The PAGE Study | NativeHawaiian | Sub | 4534 | T=0.9685 | C=0.0315 |
The PAGE Study | Cuban | Sub | 4230 | T=0.9258 | C=0.0742 |
The PAGE Study | Dominican | Sub | 3828 | T=0.9321 | C=0.0679 |
The PAGE Study | CentralAmerican | Sub | 2450 | T=0.9600 | C=0.0400 |
The PAGE Study | SouthAmerican | Sub | 1982 | T=0.9521 | C=0.0479 |
The PAGE Study | NativeAmerican | Sub | 1260 | T=0.9270 | C=0.0730 |
The PAGE Study | SouthAsian | Sub | 856 | T=0.903 | C=0.097 |
38KJPN | JAPANESE | Study-wide | 77200 | T=0.98019 | C=0.01981 |
GO Exome Sequencing Project | Global | Study-wide | 13006 | T=0.92065 | C=0.07935 |
GO Exome Sequencing Project | European American | Sub | 8600 | T=0.9009 | C=0.0991 |
GO Exome Sequencing Project | African American | Sub | 4406 | T=0.9591 | C=0.0409 |
Korean Genome Project 4K | KOREAN | Study-wide | 7232 | T=0.9858 | C=0.0142 |
1000Genomes_30X | Global | Study-wide | 6404 | T=0.9452 | C=0.0548 |
1000Genomes_30X | African | Sub | 1786 | T=0.9709 | C=0.0291 |
1000Genomes_30X | Europe | Sub | 1266 | T=0.8894 | C=0.1106 |
1000Genomes_30X | South Asian | Sub | 1202 | T=0.9334 | C=0.0666 |
1000Genomes_30X | East Asian | Sub | 1170 | T=0.9838 | C=0.0162 |
1000Genomes_30X | American | Sub | 980 | T=0.939 | C=0.061 |
1000Genomes | Global | Study-wide | 5008 | T=0.9435 | C=0.0565 |
1000Genomes | African | Sub | 1322 | T=0.9690 | C=0.0310 |
1000Genomes | East Asian | Sub | 1008 | T=0.9821 | C=0.0179 |
1000Genomes | Europe | Sub | 1006 | T=0.8807 | C=0.1193 |
1000Genomes | South Asian | Sub | 978 | T=0.939 | C=0.061 |
1000Genomes | American | Sub | 694 | T=0.937 | C=0.063 |
Genetic variation in the Estonian population | Estonian | Study-wide | 4480 | T=0.8460 | C=0.1540 |
The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | T=0.9128 | C=0.0872 |
UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | T=0.9121 | C=0.0879 |
MxGDAR/Encodat-PGx | Global | Study-wide | 3296 | T=0.9712 | C=0.0288 |
MxGDAR/Encodat-PGx | MxGDAR | Sub | 3296 | T=0.9712 | C=0.0288 |
KOREAN population from KRGDB | KOREAN | Study-wide | 2922 | T=0.9863 | C=0.0137 |
HapMap | Global | Study-wide | 1882 | T=0.9479 | C=0.0521 |
HapMap | American | Sub | 764 | T=0.950 | C=0.050 |
HapMap | African | Sub | 688 | T=0.945 | C=0.055 |
HapMap | Asian | Sub | 254 | T=0.992 | C=0.008 |
HapMap | Europe | Sub | 176 | T=0.886 | C=0.114 |
Korean Genome Project | KOREAN | Study-wide | 1832 | T=0.9864 | C=0.0136 |
Genome-wide autozygosity in Daghestan | Global | Study-wide | 1136 | T=0.8838 | C=0.1162 |
Genome-wide autozygosity in Daghestan | Daghestan | Sub | 628 | T=0.868 | C=0.132 |
Genome-wide autozygosity in Daghestan | Near_East | Sub | 144 | T=0.889 | C=0.111 |
Genome-wide autozygosity in Daghestan | Central Asia | Sub | 122 | T=0.893 | C=0.107 |
Genome-wide autozygosity in Daghestan | Europe | Sub | 108 | T=0.898 | C=0.102 |
Genome-wide autozygosity in Daghestan | South Asian | Sub | 98 | T=0.95 | C=0.05 |
Genome-wide autozygosity in Daghestan | Caucasus | Sub | 36 | T=0.89 | C=0.11 |
Genome of the Netherlands Release 5 | Genome of the Netherlands | Study-wide | 998 | T=0.910 | C=0.090 |
CNV burdens in cranial meningiomas | Global | Study-wide | 792 | T=0.981 | C=0.019 |
CNV burdens in cranial meningiomas | CRM | Sub | 792 | T=0.981 | C=0.019 |
A Vietnamese Genetic Variation Database | Global | Study-wide | 612 | T=0.969 | C=0.031 |
Northern Sweden | ACPOP | Study-wide | 600 | T=0.893 | C=0.107 |
Medical Genome Project healthy controls from Spanish population | Spanish controls | Study-wide | 534 | T=0.918 | C=0.082 |
PharmGKB Aggregated | Global | Study-wide | 356 | T=0.963 | C=0.037 |
PharmGKB Aggregated | PA149745975 | Sub | 356 | T=0.963 | C=0.037 |
FINRISK | Finnish from FINRISK project | Study-wide | 304 | T=0.789 | C=0.211 |
Qatari | Global | Study-wide | 216 | T=0.889 | C=0.111 |
SGDP_PRJ | Global | Study-wide | 68 | T=0.44 | C=0.56 |
The Danish reference pan genome | Danish | Study-wide | 40 | T=0.80 | C=0.20 |
Siberian | Global | Study-wide | 12 | T=0.50 | C=0.50 |
Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.
Sequence name | Change |
---|---|
GRCh38.p14 chr 1 | NC_000001.11:g.97699535T>A |
GRCh38.p14 chr 1 | NC_000001.11:g.97699535T>C |
GRCh37.p13 chr 1 | NC_000001.10:g.98165091T>A |
GRCh37.p13 chr 1 | NC_000001.10:g.98165091T>C |
DPYD RefSeqGene (LRG_722) | NG_008807.2:g.226525A>T |
DPYD RefSeqGene (LRG_722) | NG_008807.2:g.226525A>G |
Molecule type | Change | Amino acid[Codon] | SO Term |
---|---|---|---|
DPYD transcript variant 2 | NM_001160301.1:c. | N/A | Genic Downstream Transcript Variant |
DPYD transcript variant 1 | NM_000110.4:c.496A>T | M [ATG] > L [TTG] | Coding Sequence Variant |
dihydropyrimidine dehydrogenase [NADP(+)] isoform 1 | NP_000101.2:p.Met166Leu | M (Met) > L (Leu) | Missense Variant |
DPYD transcript variant 1 | NM_000110.4:c.496A>G | M [ATG] > V [GTG] | Coding Sequence Variant |
dihydropyrimidine dehydrogenase [NADP(+)] isoform 1 | NP_000101.2:p.Met166Val | M (Met) > V (Val) | Missense Variant |
DPYD transcript variant X2 | XM_005270562.3:c.496A>T | M [ATG] > L [TTG] | Coding Sequence Variant |
dihydropyrimidine dehydrogenase [NADP(+)] isoform X2 | XP_005270619.2:p.Met166Leu | M (Met) > L (Leu) | Missense Variant |
DPYD transcript variant X2 | XM_005270562.3:c.496A>G | M [ATG] > V [GTG] | Coding Sequence Variant |
dihydropyrimidine dehydrogenase [NADP(+)] isoform X2 | XP_005270619.2:p.Met166Val | M (Met) > V (Val) | Missense Variant |
DPYD transcript variant X1 | XM_017000507.2:c.385A>T | M [ATG] > L [TTG] | Coding Sequence Variant |
dihydropyrimidine dehydrogenase [NADP(+)] isoform X1 | XP_016855996.1:p.Met129Leu | M (Met) > L (Leu) | Missense Variant |
DPYD transcript variant X1 | XM_017000507.2:c.385A>G | M [ATG] > V [GTG] | Coding Sequence Variant |
dihydropyrimidine dehydrogenase [NADP(+)] isoform X1 | XP_016855996.1:p.Met129Val | M (Met) > V (Val) | Missense Variant |
DPYD transcript variant X3 | XM_047448076.1:c.268A>T | M [ATG] > L [TTG] | Coding Sequence Variant |
dihydropyrimidine dehydrogenase [NADP(+)] isoform X3 | XP_047304032.1:p.Met90Leu | M (Met) > L (Leu) | Missense Variant |
DPYD transcript variant X3 | XM_047448076.1:c.268A>G | M [ATG] > V [GTG] | Coding Sequence Variant |
dihydropyrimidine dehydrogenase [NADP(+)] isoform X3 | XP_047304032.1:p.Met90Val | M (Met) > V (Val) | Missense Variant |
DPYD transcript variant X4 | XM_047448077.1:c.385A>T | M [ATG] > L [TTG] | Coding Sequence Variant |
dihydropyrimidine dehydrogenase [NADP(+)] isoform X4 | XP_047304033.1:p.Met129Leu | M (Met) > L (Leu) | Missense Variant |
DPYD transcript variant X4 | XM_047448077.1:c.385A>G | M [ATG] > V [GTG] | Coding Sequence Variant |
dihydropyrimidine dehydrogenase [NADP(+)] isoform X4 | XP_047304033.1:p.Met129Val | M (Met) > V (Val) | Missense Variant |
DPYD transcript variant X5 | XM_006710397.4:c.496A>T | M [ATG] > L [TTG] | Coding Sequence Variant |
dihydropyrimidine dehydrogenase [NADP(+)] isoform X5 | XP_006710460.1:p.Met166Leu | M (Met) > L (Leu) | Missense Variant |
DPYD transcript variant X5 | XM_006710397.4:c.496A>G | M [ATG] > V [GTG] | Coding Sequence Variant |
dihydropyrimidine dehydrogenase [NADP(+)] isoform X5 | XP_006710460.1:p.Met166Val | M (Met) > V (Val) | Missense Variant |
DPYD transcript variant X6 | XR_001737014.2:n.735A>T | N/A | Non Coding Transcript Variant |
DPYD transcript variant X6 | XR_001737014.2:n.735A>G | N/A | Non Coding Transcript Variant |
Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.
ClinVar Accession | Disease Names | Clinical Significance |
---|---|---|
RCV000086499.10 | not provided | Benign |
RCV000245015.9 | not specified | Benign |
RCV000276917.7 | Dihydropyrimidine dehydrogenase deficiency | Conflicting-Interpretations-Of-Pathogenicity |
RCV001787915.2 | capecitabine response - Toxicity | Drug-Response |
RCV001787916.2 | fluorouracil response - Toxicity | Drug-Response |
RCV003891588.1 | DPYD-related disorder | Benign |
Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".
Placement | T= | A | C |
---|---|---|---|
GRCh38.p14 chr 1 | NC_000001.11:g.97699535= | NC_000001.11:g.97699535T>A | NC_000001.11:g.97699535T>C |
GRCh37.p13 chr 1 | NC_000001.10:g.98165091= | NC_000001.10:g.98165091T>A | NC_000001.10:g.98165091T>C |
DPYD RefSeqGene (LRG_722) | NG_008807.2:g.226525= | NG_008807.2:g.226525A>T | NG_008807.2:g.226525A>G |
DPYD transcript variant 1 | NM_000110.4:c.496= | NM_000110.4:c.496A>T | NM_000110.4:c.496A>G |
DPYD transcript variant 1 | NM_000110.3:c.496= | NM_000110.3:c.496A>T | NM_000110.3:c.496A>G |
DPYD transcript variant X5 | XM_006710397.4:c.496= | XM_006710397.4:c.496A>T | XM_006710397.4:c.496A>G |
DPYD transcript variant X3 | XM_006710397.3:c.496= | XM_006710397.3:c.496A>T | XM_006710397.3:c.496A>G |
DPYD transcript variant X2 | XM_006710397.2:c.496= | XM_006710397.2:c.496A>T | XM_006710397.2:c.496A>G |
DPYD transcript variant X3 | XM_006710397.1:c.496= | XM_006710397.1:c.496A>T | XM_006710397.1:c.496A>G |
DPYD transcript variant X2 | XM_005270562.3:c.496= | XM_005270562.3:c.496A>T | XM_005270562.3:c.496A>G |
DPYD transcript variant X2 | XM_005270562.2:c.496= | XM_005270562.2:c.496A>T | XM_005270562.2:c.496A>G |
DPYD transcript variant X2 | XM_005270562.1:c.496= | XM_005270562.1:c.496A>T | XM_005270562.1:c.496A>G |
DPYD transcript variant X1 | XM_017000507.2:c.385= | XM_017000507.2:c.385A>T | XM_017000507.2:c.385A>G |
DPYD transcript variant X1 | XM_017000507.1:c.385= | XM_017000507.1:c.385A>T | XM_017000507.1:c.385A>G |
DPYD transcript variant X6 | XR_001737014.2:n.735= | XR_001737014.2:n.735A>T | XR_001737014.2:n.735A>G |
DPYD transcript variant X7 | XR_001737014.1:n.735= | XR_001737014.1:n.735A>T | XR_001737014.1:n.735A>G |
DPYD transcript variant X3 | XM_047448076.1:c.268= | XM_047448076.1:c.268A>T | XM_047448076.1:c.268A>G |
DPYD transcript variant X4 | XM_047448077.1:c.385= | XM_047448077.1:c.385A>T | XM_047448077.1:c.385A>G |
dihydropyrimidine dehydrogenase [NADP(+)] isoform 1 | NP_000101.2:p.Met166= | NP_000101.2:p.Met166Leu | NP_000101.2:p.Met166Val |
dihydropyrimidine dehydrogenase [NADP(+)] isoform X5 | XP_006710460.1:p.Met166= | XP_006710460.1:p.Met166Leu | XP_006710460.1:p.Met166Val |
dihydropyrimidine dehydrogenase [NADP(+)] isoform X2 | XP_005270619.2:p.Met166= | XP_005270619.2:p.Met166Leu | XP_005270619.2:p.Met166Val |
dihydropyrimidine dehydrogenase [NADP(+)] isoform X1 | XP_016855996.1:p.Met129= | XP_016855996.1:p.Met129Leu | XP_016855996.1:p.Met129Val |
dihydropyrimidine dehydrogenase [NADP(+)] isoform X3 | XP_047304032.1:p.Met90= | XP_047304032.1:p.Met90Leu | XP_047304032.1:p.Met90Val |
dihydropyrimidine dehydrogenase [NADP(+)] isoform X4 | XP_047304033.1:p.Met129= | XP_047304033.1:p.Met129Leu | XP_047304033.1:p.Met129Val |
dihydropyrimidine dehydrogenase [NADP(+)] isoform X2 | XP_005270619.1:p.Met166= | XP_005270619.1:p.Met166Leu | XP_005270619.1:p.Met166Val |
Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.
No | Submitter | Submission ID | Date (Build) |
---|---|---|---|
1 | YUSUKE | ss3242112 | Sep 28, 2001 (100) |
2 | PERLEGEN | ss68775101 | May 17, 2007 (127) |
3 | AFFY | ss74818500 | Aug 16, 2007 (128) |
4 | ILLUMINA | ss74857738 | Dec 07, 2007 (129) |
5 | AFFY | ss76456133 | Dec 07, 2007 (129) |
6 | CGM_KYOTO | ss76866286 | Dec 07, 2007 (129) |
7 | PHARMGKB_AB_DME | ss84156640 | Dec 16, 2007 (130) |
8 | CORNELL | ss86240425 | Mar 23, 2008 (129) |
9 | CANCER-GENOME | ss86342033 | Mar 23, 2008 (129) |
10 | BCMHGSC_JDW | ss87648917 | Mar 23, 2008 (129) |
11 | KRIBB_YJKIM | ss104868949 | Feb 06, 2009 (130) |
12 | SNP500CANCER | ss105439820 | Feb 06, 2009 (130) |
13 | ENSEMBL | ss138043091 | Dec 01, 2009 (131) |
14 | ILLUMINA | ss153901421 | Dec 01, 2009 (131) |
15 | ILLUMINA | ss159379231 | Dec 01, 2009 (131) |
16 | ILLUMINA | ss160532487 | Dec 01, 2009 (131) |
17 | ILLUMINA | ss173269396 | Jul 04, 2010 (132) |
18 | BUSHMAN | ss198817775 | Jul 04, 2010 (132) |
19 | 1000GENOMES | ss230651617 | Jul 14, 2010 (132) |
20 | 1000GENOMES | ss238319989 | Jul 15, 2010 (132) |
21 | GMI | ss284103424 | Apr 25, 2013 (138) |
22 | NHLBI-ESP | ss341976728 | May 09, 2011 (134) |
23 | ILLUMINA | ss480519143 | May 04, 2012 (137) |
24 | ILLUMINA | ss480533640 | May 04, 2012 (137) |
25 | ILLUMINA | ss481344403 | Sep 08, 2015 (146) |
26 | ILLUMINA | ss485056912 | May 04, 2012 (137) |
27 | 1000GENOMES | ss489753627 | May 04, 2012 (137) |
28 | EXOME_CHIP | ss491297130 | May 04, 2012 (137) |
29 | CLINSEQ_SNP | ss491598692 | May 04, 2012 (137) |
30 | ILLUMINA | ss537073480 | Sep 08, 2015 (146) |
31 | TISHKOFF | ss554468374 | Apr 25, 2013 (138) |
32 | SSMP | ss648244872 | Apr 25, 2013 (138) |
33 | ILLUMINA | ss778491120 | Aug 21, 2014 (142) |
34 | ILLUMINA | ss780879373 | Aug 21, 2014 (142) |
35 | ILLUMINA | ss782974674 | Aug 21, 2014 (142) |
36 | ILLUMINA | ss783564968 | Aug 21, 2014 (142) |
37 | ILLUMINA | ss783935944 | Aug 21, 2014 (142) |
38 | ILLUMINA | ss832231054 | Apr 01, 2015 (144) |
39 | ILLUMINA | ss832891024 | Aug 21, 2014 (142) |
40 | ILLUMINA | ss833481854 | Aug 21, 2014 (142) |
41 | ILLUMINA | ss833947124 | Aug 21, 2014 (142) |
42 | JMKIDD_LAB | ss974436257 | Aug 21, 2014 (142) |
43 | EVA-GONL | ss975468994 | Aug 21, 2014 (142) |
44 | JMKIDD_LAB | ss1067423568 | Aug 21, 2014 (142) |
45 | JMKIDD_LAB | ss1068117749 | Aug 21, 2014 (142) |
46 | 1000GENOMES | ss1292055562 | Aug 21, 2014 (142) |
47 | HAMMER_LAB | ss1397254810 | Sep 08, 2015 (146) |
48 | DDI | ss1425907644 | Apr 01, 2015 (144) |
49 | CLINVAR | ss1536213428 | Dec 17, 2014 (142) |
50 | EVA_GENOME_DK | ss1574261062 | Apr 01, 2015 (144) |
51 | EVA_FINRISK | ss1584009487 | Apr 01, 2015 (144) |
52 | EVA_DECODE | ss1584846634 | Apr 01, 2015 (144) |
53 | EVA_UK10K_ALSPAC | ss1600788744 | Apr 01, 2015 (144) |
54 | EVA_UK10K_TWINSUK | ss1643782777 | Apr 01, 2015 (144) |
55 | EVA_EXAC | ss1685650354 | Apr 01, 2015 (144) |
56 | EVA_MGP | ss1710913168 | Apr 01, 2015 (144) |
57 | EVA_SVP | ss1712356208 | Apr 01, 2015 (144) |
58 | ILLUMINA | ss1751941303 | Sep 08, 2015 (146) |
59 | ILLUMINA | ss1751941304 | Sep 08, 2015 (146) |
60 | ILLUMINA | ss1917731627 | Feb 12, 2016 (147) |
61 | WEILL_CORNELL_DGM | ss1918669280 | Feb 12, 2016 (147) |
62 | ILLUMINA | ss1946002635 | Feb 12, 2016 (147) |
63 | ILLUMINA | ss1958296100 | Feb 12, 2016 (147) |
64 | AMU | ss1966654231 | Feb 12, 2016 (147) |
65 | JJLAB | ss2019855867 | Sep 14, 2016 (149) |
66 | ILLUMINA | ss2094783938 | Dec 20, 2016 (150) |
67 | ILLUMINA | ss2094968417 | Dec 20, 2016 (150) |
68 | USC_VALOUEV | ss2147874692 | Dec 20, 2016 (150) |
69 | HUMAN_LONGEVITY | ss2164918398 | Dec 20, 2016 (150) |
70 | ILLUMINA | ss2632552101 | Nov 08, 2017 (151) |
71 | ILLUMINA | ss2635001452 | Nov 08, 2017 (151) |
72 | GRF | ss2697801884 | Nov 08, 2017 (151) |
73 | ILLUMINA | ss2710678067 | Nov 08, 2017 (151) |
74 | GNOMAD | ss2731657562 | Nov 08, 2017 (151) |
75 | GNOMAD | ss2746378627 | Nov 08, 2017 (151) |
76 | GNOMAD | ss2758487478 | Nov 08, 2017 (151) |
77 | AFFY | ss2984868289 | Nov 08, 2017 (151) |
78 | AFFY | ss2985519710 | Nov 08, 2017 (151) |
79 | SWEGEN | ss2987285015 | Nov 08, 2017 (151) |
80 | ILLUMINA | ss3021112992 | Nov 08, 2017 (151) |
81 | BIOINF_KMB_FNS_UNIBA | ss3023691609 | Nov 08, 2017 (151) |
82 | CSIRBIOHTS | ss3029637211 | Nov 08, 2017 (151) |
83 | CSHL | ss3343589974 | Nov 08, 2017 (151) |
84 | ILLUMINA | ss3626162583 | Oct 11, 2018 (152) |
85 | ILLUMINA | ss3626162584 | Oct 11, 2018 (152) |
86 | ILLUMINA | ss3630586338 | Oct 11, 2018 (152) |
87 | ILLUMINA | ss3632902757 | Oct 11, 2018 (152) |
88 | ILLUMINA | ss3633597742 | Oct 11, 2018 (152) |
89 | ILLUMINA | ss3634338694 | Oct 11, 2018 (152) |
90 | ILLUMINA | ss3634338695 | Oct 11, 2018 (152) |
91 | ILLUMINA | ss3635291367 | Oct 11, 2018 (152) |
92 | ILLUMINA | ss3636016152 | Oct 11, 2018 (152) |
93 | ILLUMINA | ss3637041819 | Oct 11, 2018 (152) |
94 | ILLUMINA | ss3637774718 | Oct 11, 2018 (152) |
95 | ILLUMINA | ss3640046054 | Oct 11, 2018 (152) |
96 | ILLUMINA | ss3640046055 | Oct 11, 2018 (152) |
97 | ILLUMINA | ss3640984416 | Oct 11, 2018 (152) |
98 | ILLUMINA | ss3641278403 | Oct 11, 2018 (152) |
99 | ILLUMINA | ss3642784957 | Oct 11, 2018 (152) |
100 | ILLUMINA | ss3644498594 | Oct 11, 2018 (152) |
101 | OMUKHERJEE_ADBS | ss3646233654 | Oct 11, 2018 (152) |
102 | ILLUMINA | ss3651443652 | Oct 11, 2018 (152) |
103 | ILLUMINA | ss3651443653 | Oct 11, 2018 (152) |
104 | ILLUMINA | ss3653640174 | Oct 11, 2018 (152) |
105 | EGCUT_WGS | ss3655368061 | Jul 12, 2019 (153) |
106 | EVA_DECODE | ss3687342207 | Jul 12, 2019 (153) |
107 | ILLUMINA | ss3725047380 | Jul 12, 2019 (153) |
108 | ACPOP | ss3727302596 | Jul 12, 2019 (153) |
109 | ILLUMINA | ss3744348655 | Jul 12, 2019 (153) |
110 | ILLUMINA | ss3744639666 | Jul 12, 2019 (153) |
111 | ILLUMINA | ss3744639667 | Jul 12, 2019 (153) |
112 | EVA | ss3746558838 | Jul 12, 2019 (153) |
113 | PAGE_CC | ss3770827436 | Jul 12, 2019 (153) |
114 | ILLUMINA | ss3772140904 | Jul 12, 2019 (153) |
115 | ILLUMINA | ss3772140905 | Jul 12, 2019 (153) |
116 | KHV_HUMAN_GENOMES | ss3799559960 | Jul 12, 2019 (153) |
117 | EVA | ss3823633602 | Apr 25, 2020 (154) |
118 | EVA | ss3825570053 | Apr 25, 2020 (154) |
119 | EVA | ss3826320210 | Apr 25, 2020 (154) |
120 | SGDP_PRJ | ss3849451918 | Apr 25, 2020 (154) |
121 | KRGDB | ss3894526984 | Apr 25, 2020 (154) |
122 | KOGIC | ss3945068580 | Apr 25, 2020 (154) |
123 | FSA-LAB | ss3983938266 | Apr 25, 2021 (155) |
124 | EVA | ss3984447106 | Apr 25, 2021 (155) |
125 | EVA | ss3984461567 | Apr 25, 2021 (155) |
126 | EVA | ss3986128461 | Apr 25, 2021 (155) |
127 | EVA | ss4016927023 | Apr 25, 2021 (155) |
128 | TOPMED | ss4460215230 | Apr 25, 2021 (155) |
129 | EVA | ss6208443981 | Nov 02, 2024 (157) |
130 | EVA | ss6284043809 | Nov 02, 2024 (157) |
131 | EVA | ss6322091917 | Nov 02, 2024 (157) |
132 | EVA | ss6322917473 | Nov 02, 2024 (157) |
133 | EVA | ss6329345284 | Nov 02, 2024 (157) |
134 | YEGNASUBRAMANIAN_LAB | ss6334274657 | Nov 02, 2024 (157) |
135 | EVA | ss6349481154 | Nov 02, 2024 (157) |
136 | KOGIC | ss6352005927 | Nov 02, 2024 (157) |
137 | EVA | ss6403965895 | Nov 02, 2024 (157) |
138 | EVA | ss6404017298 | Nov 02, 2024 (157) |
139 | GNOMAD | ss6407783007 | Nov 02, 2024 (157) |
140 | GNOMAD | ss6494987543 | Nov 02, 2024 (157) |
141 | TOMMO_GENOMICS | ss8145255979 | Nov 02, 2024 (157) |
142 | EVA | ss8236871146 | Nov 02, 2024 (157) |
143 | EVA | ss8237270616 | Nov 02, 2024 (157) |
144 | EVA | ss8237632442 | Nov 02, 2024 (157) |
145 | 1000G_HIGH_COVERAGE | ss8243277743 | Nov 02, 2024 (157) |
146 | TRAN_CS_UWATERLOO | ss8314396343 | Nov 02, 2024 (157) |
147 | EVA | ss8314637195 | Nov 02, 2024 (157) |
148 | EVA | ss8320589277 | Nov 02, 2024 (157) |
149 | HUGCELL_USP | ss8444234078 | Nov 02, 2024 (157) |
150 | EVA | ss8505960462 | Nov 02, 2024 (157) |
151 | EVA | ss8512473828 | Nov 02, 2024 (157) |
152 | 1000G_HIGH_COVERAGE | ss8516094100 | Nov 02, 2024 (157) |
153 | EVA | ss8623915369 | Nov 02, 2024 (157) |
154 | EVA | ss8623994844 | Nov 02, 2024 (157) |
155 | SANFORD_IMAGENETICS | ss8624212923 | Nov 02, 2024 (157) |
156 | SANFORD_IMAGENETICS | ss8626107009 | Nov 02, 2024 (157) |
157 | TOMMO_GENOMICS | ss8670399619 | Nov 02, 2024 (157) |
158 | EVA | ss8799409419 | Nov 02, 2024 (157) |
159 | EVA | ss8799493171 | Nov 02, 2024 (157) |
160 | EVA | ss8800083418 | Nov 02, 2024 (157) |
161 | YY_MCH | ss8800849364 | Nov 02, 2024 (157) |
162 | EVA | ss8832354472 | Nov 02, 2024 (157) |
163 | EVA | ss8847163606 | Nov 02, 2024 (157) |
164 | EVA | ss8847548224 | Nov 02, 2024 (157) |
165 | EVA | ss8848266013 | Nov 02, 2024 (157) |
166 | EVA | ss8909421455 | Nov 02, 2024 (157) |
167 | EVA | ss8935519755 | Nov 02, 2024 (157) |
168 | EVA | ss8936510868 | Nov 02, 2024 (157) |
169 | EVA | ss8937966047 | Nov 02, 2024 (157) |
170 | EVA | ss8979283170 | Nov 02, 2024 (157) |
171 | EVA | ss8981422809 | Nov 02, 2024 (157) |
172 | EVA | ss8981429236 | Nov 02, 2024 (157) |
173 | LNCC-LABINFO | ss8982072045 | Nov 02, 2024 (157) |
174 | EVA | ss8982330906 | Nov 02, 2024 (157) |
175 | TOMMO_GENOMICS | ss8989744006 | Nov 02, 2024 (157) |
176 | 1000Genomes | NC_000001.10 - 98165091 | Oct 11, 2018 (152) |
177 | 1000Genomes_30X | NC_000001.11 - 97699535 | Nov 02, 2024 (157) |
178 | The Avon Longitudinal Study of Parents and Children | NC_000001.10 - 98165091 | Oct 11, 2018 (152) |
179 | Genome-wide autozygosity in Daghestan | NC_000001.9 - 97937679 | Apr 25, 2020 (154) |
180 | Genetic variation in the Estonian population | NC_000001.10 - 98165091 | Oct 11, 2018 (152) |
181 | ExAC | NC_000001.10 - 98165091 | Oct 11, 2018 (152) |
182 | FINRISK | NC_000001.10 - 98165091 | Apr 25, 2020 (154) |
183 | The Danish reference pan genome | NC_000001.10 - 98165091 | Apr 25, 2020 (154) |
184 | gnomAD v4 - Exomes | NC_000001.11 - 97699535 | Nov 02, 2024 (157) |
185 | gnomAD v4 - Genomes | NC_000001.11 - 97699535 | Nov 02, 2024 (157) |
186 | GO Exome Sequencing Project | NC_000001.10 - 98165091 | Oct 11, 2018 (152) |
187 | Genome of the Netherlands Release 5 | NC_000001.10 - 98165091 | Apr 25, 2020 (154) |
188 | HapMap | NC_000001.11 - 97699535 | Apr 25, 2020 (154) |
189 | KOREAN population from KRGDB | NC_000001.10 - 98165091 | Apr 25, 2020 (154) |
190 | Korean Genome Project | NC_000001.11 - 97699535 | Apr 25, 2020 (154) |
191 | Korean Genome Project 4K | NC_000001.11 - 97699535 | Nov 02, 2024 (157) |
192 | Medical Genome Project healthy controls from Spanish population | NC_000001.10 - 98165091 | Apr 25, 2020 (154) |
193 | Northern Sweden | NC_000001.10 - 98165091 | Jul 12, 2019 (153) |
194 | The PAGE Study | NC_000001.11 - 97699535 | Jul 12, 2019 (153) |
195 | CNV burdens in cranial meningiomas | NC_000001.10 - 98165091 | Apr 25, 2021 (155) |
196 | MxGDAR/Encodat-PGx | NC_000001.10 - 98165091 | Apr 25, 2021 (155) |
197 | PharmGKB Aggregated | NC_000001.11 - 97699535 | Apr 25, 2020 (154) |
198 | Qatari | NC_000001.10 - 98165091 | Apr 25, 2020 (154) |
199 | SGDP_PRJ | NC_000001.10 - 98165091 | Apr 25, 2020 (154) |
200 | Siberian | NC_000001.10 - 98165091 | Apr 25, 2020 (154) |
201 | 38KJPN | NC_000001.11 - 97699535 | Nov 02, 2024 (157) |
202 | TopMed | NC_000001.11 - 97699535 | Apr 25, 2021 (155) |
203 | UK 10K study - Twins | NC_000001.10 - 98165091 | Oct 11, 2018 (152) |
204 | A Vietnamese Genetic Variation Database | NC_000001.10 - 98165091 | Jul 12, 2019 (153) |
205 | ALFA | NC_000001.11 - 97699535 | Nov 02, 2024 (157) |
206 | ClinVar | RCV000086499.10 | Nov 02, 2024 (157) |
207 | ClinVar | RCV000245015.9 | Nov 02, 2024 (157) |
208 | ClinVar | RCV000276917.7 | Nov 02, 2024 (157) |
209 | ClinVar | RCV001787915.2 | Nov 02, 2024 (157) |
210 | ClinVar | RCV001787916.2 | Nov 02, 2024 (157) |
211 | ClinVar | RCV003891588.1 | Nov 02, 2024 (157) |
History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).
Associated ID | History Updated (Build) |
---|---|
rs52827192 | Sep 21, 2007 (128) |
rs61243782 | May 26, 2008 (130) |
rs118014431 | Aug 16, 2010 (132) |
rs199469517 | Dec 28, 2011 (136) |
Submission IDs | Observation SPDI | Canonical SPDI | Source RSIDs |
---|---|---|---|
ss8512473828 | NC_000001.10:98165090:T:A | NC_000001.11:97699534:T:A | (self) |
16117, ss87648917, ss160532487, ss198817775, ss284103424, ss480519143, ss491598692, ss1397254810, ss1584846634, ss1712356208, ss2635001452, ss3642784957 | NC_000001.9:97937678:T:C | NC_000001.11:97699534:T:C | (self) |
2817397, 1553123, 1106309, 4856287, 5948, 1623368, 92236, 673373, 1704378, 29920, 587461, 10879, 107, 711210, 1468898, 391046, 1553123, 334209, ss230651617, ss238319989, ss341976728, ss480533640, ss481344403, ss485056912, ss489753627, ss491297130, ss537073480, ss554468374, ss648244872, ss778491120, ss780879373, ss782974674, ss783564968, ss783935944, ss832231054, ss832891024, ss833481854, ss833947124, ss974436257, ss975468994, ss1067423568, ss1068117749, ss1292055562, ss1425907644, ss1574261062, ss1584009487, ss1600788744, ss1643782777, ss1685650354, ss1710913168, ss1751941303, ss1751941304, ss1917731627, ss1918669280, ss1946002635, ss1958296100, ss1966654231, ss2019855867, ss2094783938, ss2094968417, ss2147874692, ss2632552101, ss2697801884, ss2710678067, ss2731657562, ss2746378627, ss2758487478, ss2984868289, ss2985519710, ss2987285015, ss3021112992, ss3029637211, ss3343589974, ss3626162583, ss3626162584, ss3630586338, ss3632902757, ss3633597742, ss3634338694, ss3634338695, ss3635291367, ss3636016152, ss3637041819, ss3637774718, ss3640046054, ss3640046055, ss3640984416, ss3641278403, ss3644498594, ss3646233654, ss3651443652, ss3651443653, ss3653640174, ss3655368061, ss3727302596, ss3744348655, ss3744639666, ss3744639667, ss3746558838, ss3772140904, ss3772140905, ss3823633602, ss3825570053, ss3826320210, ss3849451918, ss3894526984, ss3983938266, ss3984447106, ss3984461567, ss3986128461, ss4016927023, ss6208443981, ss6284043809, ss6322091917, ss6322917473, ss6329345284, ss6334274657, ss6349481154, ss6403965895, ss8145255979, ss8237270616, ss8314637195, ss8320589277, ss8505960462, ss8512473828, ss8623915369, ss8623994844, ss8624212923, ss8626107009, ss8799409419, ss8799493171, ss8800083418, ss8832354472, ss8847163606, ss8847548224, ss8848266013, ss8935519755, ss8936510868, ss8937966047, ss8979283170, ss8981422809, ss8981429236, ss8982330906 | NC_000001.10:98165090:T:C | NC_000001.11:97699534:T:C | (self) |
RCV000086499.10, RCV000245015.9, RCV000276917.7, RCV001787915.2, RCV001787916.2, RCV003891588.1, 3620035, 3081341, 21302328, 133759, 1446581, 1857825, 48905, 322, 7119826, 23821565, 11276338187, ss1536213428, ss2164918398, ss3023691609, ss3687342207, ss3725047380, ss3770827436, ss3799559960, ss3945068580, ss4460215230, ss6352005927, ss6404017298, ss6407783007, ss6494987543, ss8236871146, ss8237632442, ss8243277743, ss8314396343, ss8444234078, ss8516094100, ss8670399619, ss8800849364, ss8909421455, ss8982072045, ss8989744006 | NC_000001.11:97699534:T:C | NC_000001.11:97699534:T:C | (self) |
ss3242112, ss68775101, ss74818500, ss74857738, ss76456133, ss76866286, ss84156640, ss86240425, ss86342033, ss104868949, ss105439820, ss138043091, ss153901421, ss159379231, ss173269396 | NT_032977.9:68137008:T:C | NC_000001.11:97699534:T:C | (self) |
Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.
PMID | Title | Author | Year | Journal |
---|---|---|---|---|
11156223 | Clinical implications of dihydropyrimidine dehydrogenase (DPD) deficiency in patients with severe 5-fluorouracil-associated toxicity: identification of new mutations in the DPD gene. | van Kuilenburg AB et al. | 2000 | Clinical cancer research |
14635116 | Detailed analysis of five mutations in dihydropyrimidine dehydrogenase detected in cancer patients with 5-fluorouracil-related side effects. | Gross E et al. | 2003 | Human mutation |
16115930 | Analysis of the DPYD gene implicated in 5-fluorouracil catabolism in a cohort of Caucasian individuals. | Seck K et al. | 2005 | Clinical cancer research |
19104657 | Strong association of a common dihydropyrimidine dehydrogenase gene polymorphism with fluoropyrimidine-related toxicity in cancer patients. | Gross E et al. | 2008 | PloS one |
19473056 | Influence of dihydropyrimidine dehydrogenase gene (DPYD) coding sequence variants on the development of fluoropyrimidine-related toxicity in patients with high-grade toxicity and patients with excellent tolerance of fluoropyrimidine-based chemotherapy. | Kleibl Z et al. | 2009 | Neoplasma |
20803296 | Intragenic deletions and a deep intronic mutation affecting pre-mRNA splicing in the dihydropyrimidine dehydrogenase gene as novel mechanisms causing 5-fluorouracil toxicity. | van Kuilenburg AB et al. | 2010 | Human genetics |
21498394 | Relationship between single nucleotide polymorphisms and haplotypes in DPYD and toxicity and efficacy of capecitabine in advanced colorectal cancer. | Deenen MJ et al. | 2011 | Clinical cancer research |
22992668 | Pharmacogenomics knowledge for personalized medicine. | Whirl-Carrillo M et al. | 2012 | Clinical pharmacology and therapeutics |
23692340 | Genetic variation in MKL2 and decreased downstream PCTAIRE1 expression in extreme, fatal primary human microcephaly. | Ramos EI et al. | 2014 | Clinical genetics |
23736036 | Pharmacogenetic variants in the DPYD, TYMS, CDA and MTHFR genes are clinically significant predictors of fluoropyrimidine toxicity. | Loganayagam A et al. | 2013 | British journal of cancer |
24648345 | Comparative functional analysis of DPYD variants of potential clinical relevance to dihydropyrimidine dehydrogenase activity. | Offer SM et al. | 2014 | Cancer research |
24944790 | Screening for 392 polymorphisms in 141 pharmacogenes. | Kim JY et al. | 2014 | Biomedical reports |
25110414 | Pharmacogenetics research on chemotherapy resistance in colorectal cancer over the last 20 years. | Panczyk M et al. | 2014 | World journal of gastroenterology |
25741868 | Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology. | Richards S et al. | 2015 | Genetics in medicine |
25782327 | DPD and UGT1A1 deficiency in colorectal cancer patients receiving triplet chemotherapy with fluoropyrimidines, oxaliplatin and irinotecan. | Falvella FS et al. | 2015 | British journal of clinical pharmacology |
26099996 | Clinical validity of a DPYD-based pharmacogenetic test to predict severe toxicity to fluoropyrimidines. | Toffoli G et al. | 2015 | International journal of cancer |
26216193 | Genotype-phenotype correlations in 5-fluorouracil metabolism: a candidate DPYD haplotype to improve toxicity prediction. | Gentile G et al. | 2016 | The pharmacogenomics journal |
26801900 | Pharmacogenetics driving personalized medicine: analysis of genetic polymorphisms related to breast cancer medications in Italian isolated populations. | Cocca M et al. | 2016 | Journal of translational medicine |
29065426 | Dihydropyrimidine dehydrogenase pharmacogenetics for predicting fluoropyrimidine-related toxicity in the randomised, phase III adjuvant TOSCA trial in high-risk colon cancer patients. | Ruzzo A et al. | 2017 | British journal of cancer |
32619063 | Impact of DPYD, DPYS, and UPB1 gene variations on severe drug-related toxicity in patients with cancer. | Yokoi K et al. | 2020 | Cancer science |
33384710 | The Co-existence of ADHD With Autism in Saudi Children: An Analysis Using Next-Generation DNA Sequencing. | Bogari NM et al. | 2020 | Frontiers in genetics |
33491253 | Haplotype structure defines effects of common DPYD variants c.85T > C (rs1801265) and c.496A > G (rs2297595) on dihydropyrimidine dehydrogenase activity: Implication for 5-fluorouracil toxicity. | Hamzic S et al. | 2021 | British journal of clinical pharmacology |
33519226 | Genetic Diversity of Drug-Related Genes in Native Americans of the Brazilian Amazon. | Fernandes MR et al. | 2021 | Pharmacogenomics and personalized medicine |
33767731 | Potential Impact of DPYD Variation on Fluoropyrimidine Drug Response in sub-Saharan African Populations. | da Rocha JEB et al. | 2021 | Frontiers in genetics |
34621706 | Comprehensive analysis of important pharmacogenes in Koreans using the DMET™ platform. | Kim B et al. | 2021 | Translational and clinical pharmacology |
34780066 | DPYD polymorphisms c.496A>G, c.2194G>A and c.85T>C and risk of severe adverse drug reactions in patients treated with fluoropyrimidine-based protocols. | Božina N et al. | 2022 | British journal of clinical pharmacology |
35582139 | The use of pharmacogenetics to increase the safety of colorectal cancer patients treated with fluoropyrimidines. | De Mattia E et al. | 2019 | Cancer drug resistance (Alhambra, Calif.) |
36980706 | Influence of Single-Nucleotide Polymorphisms on Clinical Outcomes of Capecitabine-Based Chemotherapy in Colorectal Cancer Patients: A Systematic Review. | Cura Y et al. | 2023 | Cancers |
The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.
Genomic regions, transcripts, and products
Top▲
Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.