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    lyz lysozyme, former name: gene 17 [ Escherichia phage P1 ]

    Gene ID: 2777454, updated on 12-Jan-2023

    Summary

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    Gene symbol
    lyz
    Gene description
    lysozyme, former name: gene 17
    Locus tag
    P1_gp015
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia phage P1 (isolate: mod749::IS5 c1.100 mutant, nat-host: Escherichia coli)
    Lineage
    Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Punavirus
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    Genomic context

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    Sequence:
    NC_005856.1 (20325..20882, complement)

    NC_005856.1Genomic Context describing neighboring genes Neighboring gene portal, putative Neighboring gene head processing; former name: gene 4 Neighboring gene lysis determinant, putative antiholin Neighboring gene lysis determinant, putative holin Neighboring gene gene for the single-stranded DNA binding protein homolog Neighboring gene IS1 insertion-associated gene

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_005856.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Disulfide isomerization after membrane release of its SAR domain activates P1 lysozyme. Xu M, et al. Science, 2005 Jan 7. PMID 15637279
    2. Genome of bacteriophage P1. Łobocka MB, et al. J Bacteriol, 2004 Nov. PMID 15489417, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • 100 pct identical to previously identified gene 17 of P1 at nt 211..768 of P1 sequence fragment deposited as locus BACP117 in GenBank Accession Number X87673 and to lysA of P1 at nt 4993..5550 of P1 fragment deposited as locus AF125376 in GenBank Accession Number AF125376

    General protein information

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    Preferred Names
    endolysin
    YP_006484.1
    • product 100 pct identical to previously identified gp17 protein of P1 in GenBank Accession Number CAA61013; region of aa 10-179 52 pct identical to putative phage lysosyme of Yersinia pestis (NP_405650, 170 aa); region of aa 35-179 48 pct identical to region of aa 40-184 of Haemophilus influenza phage HP1 (LYCV_BPHP1; 186 aa); similar to lysozymes of other phages

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_005856.1 Reference assembly

      Range
      20325..20882 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_006484.1 endolysin [Escherichia phage P1]

      See identical proteins and their annotated locations for YP_006484.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q37875
      UniProtKB/TrEMBL
      Q71TF3
      Conserved Domains (1) summary
      cd16901
      Location:29 → 179
      lyz_P1; P1 lysozyme Lyz-like proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q37875.1

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