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    LOC127073781 galactoside 2-alpha-L-fucosyltransferase [ Pisum sativum (garden pea) ]

    Gene ID: 127073781, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC127073781
    Gene description
    galactoside 2-alpha-L-fucosyltransferase
    Locus tag
    KIW84_041641
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Pisum sativum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Fabeae; Pisum
    Also known as
    FT1; PsFT1
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    Genomic context

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    See LOC127073781 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current CAAS_Psat_ZW6_1.0 (GCF_024323335.1) 4 NC_066582.1 (107117872..107120198)

    Chromosome 4 - NC_066582.1Genomic Context describing neighboring genes Neighboring gene NEP1-interacting protein-like 2 Neighboring gene ribulose-phosphate 3-epimerase, chloroplastic Neighboring gene secreted RxLR effector protein 161-like Neighboring gene uncharacterized LOC127073782

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_066582.1 Chromosome 4 Reference CAAS_Psat_ZW6_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Biochemical characterization and molecular cloning of an alpha-1,2-fucosyltransferase that catalyzes the last step of cell wall xyloglucan biosynthesis in pea. Faik A, et al. J Biol Chem, 2000 May 19. PMID 10747946
    2. Transcriptome sequencing for high throughput SNP development and genetic mapping in Pea. Duarte J, et al. BMC Genomics, 2014 Feb 12. PMID 24521263, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables galactoside 2-alpha-L-fucosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell wall biogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in xyloglucan biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    galactoside 2-alpha-L-fucosyltransferase
    Names
    Xyloglucan alpha-(1,2)-fucosyltransferase
    xyloglucan fucosyltransferase
    XP_050870960.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001426831.1 → NP_001413760.1  galactoside 2-alpha-L-fucosyltransferase

      Status: VALIDATED

      Source sequence(s)
      GAMJ01016501, GEUU01045941
      UniProtKB/Swiss-Prot
      Q9M5Q1
      UniProtKB/TrEMBL
      A0A9D5ASB6

    RefSeqs of Annotated Genomes: Pisum sativum Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CAAS_Psat_ZW6_1.0

    Genomic

    1. NC_066582.1 Reference CAAS_Psat_ZW6_1.0

      Range
      107117872..107120198
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051015003.1 → XP_050870960.1  galactoside 2-alpha-L-fucosyltransferase

    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9M5Q1.1 GenPept UniProtKB/Swiss-Prot:Q9M5Q1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases