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--></script> <meta name='referrer' content='origin-when-cross-origin'/><link type="text/css" rel="stylesheet" href="//static.pubmed.gov/portal/portal3rc.fcgi/4199987/css/4874/4955/3251144/186073/3251483/5182.css" /><script type="text/javascript"> var ObjectLinks=[{i:0, ename: "p$ExL", esid:"*", sname: "p$ExL", ssid:"*", dname:"p$el", dsid:"0",m:"CopyValue",p:[],f: function(src, dst) {fn_CopyValue(src, dst);}}] var ActiveNames = {"p$ExL":1, "GDSBrowser_L.GDSBrowser_C.DatasetTable_C.DatasetTable.DetailedView":0, "GDSBrowser_L.GDSBrowser_C.DatasetTable_C.DatasetTable.HiddenGDS":0, "GDSBrowser_L.GDSBrowser_C.DatasetTable_C.DatasetTable.Sort":0, "GDSBrowser_L.GDSBrowser_C.GDSBrowserQuery.Clear":0, "GDSBrowser_L.GDSBrowser_C.GDSBrowserQuery.Search":1, "GDSBrowser_L.GDSBrowser_C.GDSBrowserQuery.ShowAll":1, "GDSBrowser_L.GDSBrowser_C.GDSBrowserQuery.Term":0}; </script></head> <body> <div id="all"> <div id="header"> <div id="ncbi-image"> <a href="/"> <img width="145" height="66" border="0" alt="National Center for Biotechnology Information (NCBI)" src="/geo/img/ncbi_logo.gif" /> </a> </div> <div id="gds-image"> <a href="/sites/GDSbrowser/"> <img alt="GEO DataSet Browser" src="/geo/img/GDSbrowser_logo.png" /> </a> </div> <div id="geo-image"> <a href="/geo/"> <img border="0" alt="Gene Expression Omnibus (GEO)" src="/geo/img/geo_main.gif" /> </a> </div> </div> <div id="main"> <form enctype="application/x-www-form-urlencoded" name="GDSBrowserQuery" method="post" onsubmit="return false;" action="/sites/GDSbrowser" id="GDSBrowserQuery"> <div id="query"> <table summary="Query bar components"> <tr> <td> <div id="search_bar"><label for="term">Search for </label><input name="GDSBrowser_L.GDSBrowser_C.GDSBrowserQuery.Term" sid="1" type="text" id="term" value="GDS3719[ACCN]" size="45" /> <button name="GDSBrowser_L.GDSBrowser_C.GDSBrowserQuery.Search" sid="1" id="SearchButton" submit="yes">Search</button> <button name="GDSBrowser_L.GDSBrowser_C.GDSBrowserQuery.Clear" sid="1" id="ClearButton">Clear</button> <button name="GDSBrowser_L.GDSBrowser_C.GDSBrowserQuery.ShowAll" sid="1" id="ShowAll" submit="yes">Show All</button> <a class="button" href="/gds?term=gds[filter]">Advanced Search</a></div> </td> <td class="paging"> </td> </tr> <tr> <td> </td> <td class="paging"> </td> </tr> </table> </div> <div><input name="GDSBrowser_L.GDSBrowser_C.DatasetTable_C.DatasetTable.Sort" sid="1" type="hidden" value="" /><input name="GDSBrowser_L.GDSBrowser_C.DatasetTable_C.DatasetTable.HiddenGDS" sid="1" type="hidden" value="3719" /><input name="GDSBrowser_L.GDSBrowser_C.DatasetTable_C.DatasetTable.DetailedView" sid="1" type="hidden" value="analysis" /></div> <input type="hidden" name="p$a" id="p$a" /><input type="hidden" name="p$l" id="p$l" value="GDSBrowser_L" /><input type="hidden" name="p$st" id="p$st" value="GDSbrowser" /><input name="SessionId" id="SessionId" value="CE8B5AF87C7FFCB1_0191SID" disabled="disabled" type="hidden" /><input name="Snapshot" id="Snapshot" value="/projects/GEO/GDSBrowser@1.51" disabled="disabled" type="hidden" /></form> <div id="details"><table id="gds_details" class="gds_panel" summary="GEO DataSet Details"><tr class="caption"><th colspan="5"> DataSet Record GDS3719: <a href="/geoprofiles?term=GDS3719[ACCN]" target="_blank" class="button" title="View Expression Profiles"> Expression Profiles </a><a href="#details" class="button" onclick="displayAnalysis(3719); return true" title="Data Analysis Tools"> Data Analysis Tools </a><a href="#details" class="button" onclick="displaySamples(3719); return true" title="Sample Subsets"> Sample Subsets </a></th></tr><tr><th scope="row" class="not_caption"> Title: </th><td colspan="3">Transcription factor Ovo1 depletion effect on 12 hour post-fertilization embryos</td><td id="detailsRightCol" rowspan="7"><fieldset><legend>Cluster Analysis</legend><a id="clusterLink" title="GDS3719 Cluster Analysis" href="/geo/gds/analyze/analyze.cgi?ID=GDS3719" target="_blank"><img alt="GDS3719 Cluster Image" width="80" height="80" src="/geo/img/UPGMA/UCorrelated/GDS3719i.png" /></a></fieldset><fieldset><legend>Download</legend><ul><li><a href="https://ftp.ncbi.nlm.nih.gov/geo/datasets/GDS3nnn/GDS3719/soft/GDS3719_full.soft.gz" title="Contains DataSet information, experiment variable subsets and expression value measurements (plain text, tab-delimited format)." class="dataset-soft-full"> DataSet full SOFT file </a></li><li><a href="https://ftp.ncbi.nlm.nih.gov/geo/datasets/GDS3nnn/GDS3719/soft/GDS3719.soft.gz" title="Contains DataSet information, experiment variable subsets, expression value measurements and up-to-date gene annotation for the DataSet Platform (plain text, tab-delimited format)." class="dataset-soft"> DataSet SOFT file </a></li><li><a href="https://ftp.ncbi.nlm.nih.gov/geo/series/GSE21nnn/GSE21539/soft/GSE21539_family.soft.gz" title="Contains the complete, original, submitter-supplied records that form the basis of this DataSet (plain text, tab-delimited format)." class="series-family-soft"> Series family SOFT file </a></li><li><a href="https://ftp.ncbi.nlm.nih.gov/geo/series/GSE21nnn/GSE21539/miniml/GSE21539_family.xml.tgz" title="Contains the complete, original, submitter-supplied records that form the basis of this DataSet (XML format)." class="series-family-miniml"> Series family MINiML file </a></li><li><a href="https://ftp.ncbi.nlm.nih.gov/geo/platforms/GPL1nnn/GPL1319/annot/GPL1319.annot.gz" title="Contains up-to-date gene annotation for the DataSet Platform (plain text, tab-delimited format)." class="annotation-soft"> Annotation SOFT file </a></li></ul></fieldset></td></tr><tr><th scope="row" class="not_caption"> Summary: </th><td colspan="3">Analysis of wild-type embryos injected with Ovo1 morpholino antisense oligos. At 12 hpf, the Ovo1 morphants begin showing neural crest (NC) defects wherein a subset of NC cells aggregates in the dorsal midline above the neural tube. Results provide insight into the role of Ovo1 in NC migration.</td></tr><tr><th scope="row" class="not_caption">Organism: </th><td colspan="3" class="species"><a target="_blank" href="/Taxonomy/Browser/wwwtax.cgi?mode=Undef&lvl=0&srchmode=1&name=Danio%20rerio">Danio rerio</a></td></tr><tr><th scope="row" class="not_caption"> Platform: </th><td colspan="3"><a href="/geo/query/acc.cgi?acc=GPL1319" target="_blank"> GPL1319</a>: [Zebrafish] Affymetrix Zebrafish Genome Array</td></tr><tr><th scope="row" class="not_caption">Citation:</th><td colspan="3"><div class="PubmedCitation"><ul><li><span class="authors">Piloto S, Schilling TF. </span><span class="title">Ovo1 links Wnt signaling with N-cadherin localization during neural crest migration. </span><span class="source">Development</span> 2010 Jun;137(12):1981-90. PMID: <a title="Link to PubMed record" href="https://www.ncbi.nlm.nih.gov/pubmed/20463035">20463035</a></li></ul></div></td></tr><tr><th scope="row" class="not_caption"> Reference Series: </th><td><a href="/geo/query/acc.cgi?acc=GSE21539" target="_blank"> GSE21539</a></td><th id="samp-cnt" class="not_caption"> Sample count: </th><td>6</td></tr><tr><th scope="row" class="not_caption"> Value type: </th><td>count</td><th id="series-pub" class="not_caption"> Series published: </th><td>2010/04/28</td></tr></table><div id="divExtra"></div></div> </div> <div id="footer"> <ul> <li class="first"><a href="https://www.nlm.nih.gov/">NLM</a></li> <li><a href="https://www.nih.gov/">NIH</a></li> <li><a href="mailto:geo@ncbi.nlm.nih.gov">GEO Help</a></li> <li><a href="/geo/info/disclaimer.html">Disclaimer</a></li> <li><a href="https://www.nlm.nih.gov/accessibility.html">Accessibility</a></li> </ul> </div> </div> <script type="text/javascript" src="/portal/portal3rc.fcgi/rlib/js/InstrumentOmnitureBaseJS/InstrumentNCBIBaseJS/InstrumentPageStarterJS.js"></script> <script type="text/javascript"> jQuery.getScript("/core/alerts/alerts.js", function () { galert(['div.nav_and_browser', 'div.header', '#universal_header', '#header']) }); </script> <!-- CE8B5AF87C7FFCB1_0191SID /projects/GEO/GDSBrowser@1.51 portal104 v4.1.r689238 Tue, Oct 22 2024 16:10:51 --> <span id="portal-csrf-token" style="display:none" data-token="CE8B5AF87C7FFCB1_0191SID"></span> <script type='text/javascript' src='/portal/js/portal.js'></script><script type="text/javascript" src="//static.pubmed.gov/portal/portal3rc.fcgi/4199987/js/4962/4093349/4807/3867120/3251151.js" snapshot="GDSbrowser"></script></body> </html>