"Appl Environ Microbiol"[jour] - PMC

Thorben Reiche, Gunhild Hageskal, Mihai Mares, Sunniva Hoel, Anne Tøndervik, Tonje Marita Bjerkan Heggeset, Tone Haugen, Sigri Bakken Sperstad, Hanne Hein Trøen, Solfrid Bjørkøy, Anita Nordeng Jakobsen

Appl Environ Microbiol. 2025 Mar; 91(3): e02401-24. Published online 2025 Feb 26. doi: 10.1128/aem.02401-24

PMCID:: PMC11921370

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Fungicide use intensity influences the soil microbiome and links to fungal disease suppressiveness in amenity turfgrass

Ming-Yi Chou, Apoorva Tarihalkar Patil, Daowen Huo, Qiwei Lei, Jenny Kao-Kniffin, Paul Koch

Appl Environ Microbiol. 2025 Mar; 91(3): e01771-24. Published online 2025 Feb 21. doi: 10.1128/aem.01771-24

PMCID:: PMC11921360

Article PDF–3.7M

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Cometabolism of ferrihydrite reduction and methyl-dismutating methanogenesis by Methanosarcina mazei

Chaojie Guo, Yahai Lu

Appl Environ Microbiol. 2025 Mar; 91(3): e02238-24. Published online 2025 Feb 13. doi: 10.1128/aem.02238-24

PMCID:: PMC11921357

Article PDF–1.8M

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Branched-chain amino acid metabolism supports Roseobacteraceae positive interactions in marine biofilms

Han Cui, Shuaitao Wang, Shen Fan, Hongan Long, Jinshui Lin, Wei Ding, Weipeng Zhang

Appl Environ Microbiol. 2025 Mar; 91(3): e02411-24. Published online 2025 Feb 11. doi: 10.1128/aem.02411-24

PMCID:: PMC11921356

Article PDF–1.8M

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Phylogenetic analysis of plant-pathogenic and non-pathogenic Trichoderma isolates on maize from plants, soil, and commercial bio-products

Annette Pfordt, Clovis Douanla-Meli, Bernhard C. Schäfer, Gritta Schrader, Eike Tannen, Madhav Jatin Chandarana, Andreas von Tiedemann

Appl Environ Microbiol. 2025 Mar; 91(3): e01931-24. Published online 2025 Feb 27. doi: 10.1128/aem.01931-24

PMCID:: PMC11921352

Article PDF–1.1M

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Gut-binding peptides as potential tools to reduce virus binding to honey bee gut surface proteins

Ya Guo, Lincoln N. Taylor, Ruchir Mishra, Adam G. Dolezal, Bryony C. Bonning

Appl Environ Microbiol. 2025 Mar; 91(3): e02418-24. Published online 2025 Feb 28. doi: 10.1128/aem.02418-24

PMCID:: PMC11921348

Article PDF–2.0M

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Campylobacter jejuni ST353 and ST464 cause localized gut inflammation, crypt damage, and extraintestinal spread during large- and small-scale infection in broiler chickens

Heather M. Chick, Lisa K. Williams, Nick Sparks, Farina Khattak, Paul Vermeij, Inge Frantzen, Mandy Peeters, Jetta J. E. Bijlsma, Daniel John, Timothy Ogunrin, Keioni Essex, Caroline Cayrou, Venkateswarlu Kanamarlapudi, Christopher D. Bayliss, Julian M. Ketley, Thomas J. Humphrey, Steven P. Rushton, Thomas S. Wilkinson

Appl Environ Microbiol. 2025 Mar; 91(3): e01614-24. Published online 2025 Feb 18. doi: 10.1128/aem.01614-24

PMCID:: PMC11921347

Article PDF–3.2M

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Traits determine dispersal and colonization abilities of microbes

Isidora Echenique-Subiabre, Sara L. Jackrel, Jay McCarren, Chase C. James, Elisabet Perez-Coronel, Cindy Tran, Madeline Perreault, Ugbad Farah, P. Signe White, Henry K. Baker, Christopher B. Wall, Lindsay Sager, Scott Becker, Andrew D. Barton, Jonathan B. Shurin

Appl Environ Microbiol. 2025 Mar; 91(3): e02055-24. Published online 2025 Feb 20. doi: 10.1128/aem.02055-24

PMCID:: PMC11921345

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Bumble bee gut microbial community structure differs between species and commercial suppliers, but metabolic potential remains largely consistent

Michelle Z. Hotchkiss, Alexandre J. Poulain, Jessica R. K. Forrest

Appl Environ Microbiol. 2025 Mar; 91(3): e02036-24. Published online 2025 Feb 6. doi: 10.1128/aem.02036-24

PMCID:: PMC11921327

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The production of esters by specific sourdough lactic acid bacteria species is limited by the precursor concentrations

Inés Pradal, Stefan Weckx, Luc De Vuyst

Appl Environ Microbiol. 2025 Mar; 91(3): e02216-24. Published online 2025 Feb 27. doi: 10.1128/aem.02216-24

PMCID:: PMC11921326

Article PDF–1.6M

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Antimicrobial resistance of Vibrio spp. from the coastal California system: discordance between genotypic and phenotypic patterns

Peter J. Sebastian, Cory Schlesener, Barbara A. Byrne, Melissa Miller, Woutrina Smith, Francesca Batac, Caroline E. C. Goertz, Bart C. Weimer, Christine K. Johnson

Appl Environ Microbiol. 2025 Mar; 91(3): e01808-24. Published online 2025 Feb 3. doi: 10.1128/aem.01808-24

PMCID:: PMC11921324

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Polysulfides promote protein disulfide bond formation in microorganisms growing under anaerobic conditions

Yuping Xin, Qingda Wang, Jianming Yang, Xiaohua Wu, Yongzhen Xia, Luying Xun, Huaiwei Liu

Appl Environ Microbiol. 2025 Mar; 91(3): e01926-24. Published online 2025 Feb 7. doi: 10.1128/aem.01926-24

PMCID:: PMC11921322

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Salmonella serotypes in the genomic era: simplified Salmonella serotype interpretation from DNA sequence data

Xiangyu Deng, Shaoting Li, Tongzhou Xu, Zhemin Zhou, Michelle M. Moore, Ruth Timme, Shaohua Zhao, Charlotte Lane, Blake A. Dinsmore, François‑Xavier Weill, Patricia I. Fields

Appl Environ Microbiol. 2025 Mar; 91(3): e02600-24. Published online 2025 Feb 24. doi: 10.1128/aem.02600-24