Entry - #617244 - FANCONI ANEMIA, COMPLEMENTATION GROUP R; FANCR - OMIM
# 617244

FANCONI ANEMIA, COMPLEMENTATION GROUP R; FANCR


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
15q15.1 Fanconi anemia, complementation group R 617244 AD 3 RAD51 179617
Clinical Synopsis
 
Phenotypic Series
 

INHERITANCE
- Autosomal dominant
GROWTH
Other
- Growth retardation
HEAD & NECK
Head
- Microcephaly
Eyes
- Microphthalmia
Teeth
- Dental anomalies
ABDOMEN
Gastrointestinal
- Imperforate anus
GENITOURINARY
External Genitalia (Male)
- Abnormal testicle
Kidneys
- Displaced kidney
SKELETAL
Spine
- Scoliosis
Limbs
- Radial ray anomalies
Hands
- Thumb anomalies
NEUROLOGIC
Central Nervous System
- Hydrocephalus
- Delayed early milestones
- Intellectual disability (1 patient)
- Learning disabilities (1 patient)
HEMATOLOGY
- No bone marrow failure
- No anemia
LABORATORY ABNORMALITIES
- Chromosome instability
- Increased chromosomal breakage and in response to DNA crosslinking agents
- Defective DNA repair of interstrand crosslinks
MISCELLANEOUS
- Onset in early childhood
- Two unrelated patients have been reported (last curated June 2020)
MOLECULAR BASIS
- Caused by mutation in the RAD51 recombinase gene (RAD51, 179617.0005)
Fanconi anemia - PS227650 - 21 Entries
Location Phenotype Inheritance Phenotype
mapping key
Phenotype
MIM number
Gene/Locus Gene/Locus
MIM number
1p36.22 ?Fanconi anemia, complementation group V AR 3 617243 MAD2L2 604094
1q32.1 Fanconi anemia, complementation group T AR 3 616435 UBE2T 610538
2p16.1 Fanconi anemia, complementation group L AR 3 614083 PHF9 608111
3p25.3 Fanconi anemia, complementation group D2 AR 3 227646 FANCD2 613984
6p21.31 Fanconi anemia, complementation group E AR 3 600901 FANCE 613976
7q36.1 ?Fanconi anemia, complementation group U AR 3 617247 XRCC2 600375
9p13.3 Fanconi anemia, complementation group G AR 3 614082 XRCC9 602956
9q22.32 Fanconi anemia, complementation group C AR 3 227645 FANCC 613899
11p14.3 Fanconi anemia, complementation group F AR 3 603467 FANCF 613897
13q13.1 Fanconi anemia, complementation group D1 AR 3 605724 BRCA2 600185
15q15.1 Fanconi anemia, complementation group R AD 3 617244 RAD51 179617
15q26.1 Fanconi anemia, complementation group I AR 3 609053 FANCI 611360
16p13.3 Fanconi anemia, complementation group P AR 3 613951 SLX4 613278
16p13.12 Fanconi anemia, complementation group Q AR 3 615272 ERCC4 133520
16p12.2 Fanconi anemia, complementation group N AR 3 610832 PALB2 610355
16q23.1 ?Fanconi anemia, complementation group W AR 3 617784 RFWD3 614151
16q24.3 Fanconi anemia, complementation group A AR 3 227650 FANCA 607139
17q21.31 Fanconi anemia, complementation group S AR 3 617883 BRCA1 113705
17q22 Fanconi anemia, complementation group O AR 3 613390 RAD51C 602774
17q23.2 Fanconi anemia, complementation group J 3 609054 BRIP1 605882
Xp22.2 Fanconi anemia, complementation group B XLR 3 300514 FANCB 300515

TEXT

A number sign (#) is used with this entry because of evidence that Fanconi anemia of complementation group R (FANCR) is caused by heterozygous mutation in the RAD51 gene (179617) on chromosome 15q15.

For a discussion of genetic heterogeneity of Fanconi anemia, see FANCA (227650).


Clinical Features

Ameziane et al. (2015) reported a 23-year-old man with an atypical form of Fanconi anemia. He presented at 2.5 years of age with growth retardation, microcephaly, hydrocephalus, thumb and radial abnormalities, imperforate anus, and an improperly formed testicle. He did not have bone marrow failure or malignancies. Laboratory studies of patient cells showed hypersensitivity to crosslinking agents, resulting in increased chromosomal breakage and accumulation of cells in the late S-G2 phase of the cell cycle. Patient cells showed normal monoubiquitination of FANCD2 (613984), suggesting a defect downstream of the core FA complex. Additional cellular studies indicated a defect in DNA repair.

Wang et al. (2015) reported a 13-year-old girl who was born with right radial aplasia, absent right thumb, and pelvic left kidney. She also had microcephaly, type I Chiari malformation, tethered spinal cord, and unilateral moderate to severe hearing loss. Additional features included absence of several teeth, scoliosis, and mildly delayed early milestones. However, her IQ was above average and she had no learning disabilities at age 13. She did not have bone marrow failure or malignancies. Laboratory studies showed increased sensitivity to cross-linking agents, indicating a defect in interstrand cross-link DNA repair, although her cells were not sensitive to ionizing radiation, suggesting that the homologous recombination pathway was intact.


Inheritance

The heterozygous mutations in the RAD51 gene that were identified in patients with FANCR by Ameziane et al. (2015) and Wang et al. (2015) occurred de novo.


Molecular Genetics

In a patient with FANCR, Ameziane et al. (2015) identified a de novo heterozygous missense mutation in the RAD51 gene (A293T; 179617.0005). The mutation was found by whole-genome sequencing and confirmed by Sanger sequencing. In vitro functional expression assays showed that the mutant protein reduced the formation of D-loop intermediates, which measures homology-dependent joint molecule formation during DNA repair by homologous recombination. Biochemical studies showed that the mutation impairs the binding of RAD51 to single- and double-stranded DNA and attenuates the DNA-stimulated ATPase activity of RAD51. The mutant protein was unable to form proper and functional nucleoprotein filaments, and acted in a dominant-negative manner when coexpressed with the wildtype protein.

In a girl with FANCR, Wang et al. (2015) identified a de novo heterozygous missense mutation in the RAD51 gene (T131P; 179617.0007). The mutation was found by whole-exome sequencing.


REFERENCES

  1. Ameziane, N., May, P., Haitjema, A., van de Vrugt, H. J., van Rossum-Fikket, S. E., Ristc, D., Williams, G. J., Balk, J., Rockx, D., Li, H., Rooimans, M. A., Oostra, A. B., and 17 others. A novel Fanconi anaemia subtype associated with a dominant-negative mutation in RAD51. Nature Commun. 6: 8829, 2015. Note: Electronic Article. [PubMed: 26681308, images, related citations] [Full Text]

  2. Wang, A. T., Kim, T., Wagner, J. E., Conti, B. A., Lach, F. P., Huang, A. L., Molina, H., Sanborn, E. M., Zierhut, H., Cornes, B. K., Abhyankar, A., Sougnez, C., Gabriel, S. B., Auerbach, A. D., Kowalczykowski, S. C., Smogorzewska, A. A dominant mutation in human RAD51 reveals its function in DNA interstrand crosslink repair independent of homologous recombination. Molec. Cell 59: 478-490, 2015. [PubMed: 26253028, related citations] [Full Text]


Contributors:
Cassandra L. Kniffin - updated : 06/07/2020
Creation Date:
Cassandra L. Kniffin : 12/07/2016
carol : 06/11/2020
carol : 06/10/2020
ckniffin : 06/07/2020
carol : 12/09/2016
ckniffin : 12/08/2016

# 617244

FANCONI ANEMIA, COMPLEMENTATION GROUP R; FANCR


ORPHA: 84;   DO: 0111090;  


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
15q15.1 Fanconi anemia, complementation group R 617244 Autosomal dominant 3 RAD51 179617

TEXT

A number sign (#) is used with this entry because of evidence that Fanconi anemia of complementation group R (FANCR) is caused by heterozygous mutation in the RAD51 gene (179617) on chromosome 15q15.

For a discussion of genetic heterogeneity of Fanconi anemia, see FANCA (227650).


Clinical Features

Ameziane et al. (2015) reported a 23-year-old man with an atypical form of Fanconi anemia. He presented at 2.5 years of age with growth retardation, microcephaly, hydrocephalus, thumb and radial abnormalities, imperforate anus, and an improperly formed testicle. He did not have bone marrow failure or malignancies. Laboratory studies of patient cells showed hypersensitivity to crosslinking agents, resulting in increased chromosomal breakage and accumulation of cells in the late S-G2 phase of the cell cycle. Patient cells showed normal monoubiquitination of FANCD2 (613984), suggesting a defect downstream of the core FA complex. Additional cellular studies indicated a defect in DNA repair.

Wang et al. (2015) reported a 13-year-old girl who was born with right radial aplasia, absent right thumb, and pelvic left kidney. She also had microcephaly, type I Chiari malformation, tethered spinal cord, and unilateral moderate to severe hearing loss. Additional features included absence of several teeth, scoliosis, and mildly delayed early milestones. However, her IQ was above average and she had no learning disabilities at age 13. She did not have bone marrow failure or malignancies. Laboratory studies showed increased sensitivity to cross-linking agents, indicating a defect in interstrand cross-link DNA repair, although her cells were not sensitive to ionizing radiation, suggesting that the homologous recombination pathway was intact.


Inheritance

The heterozygous mutations in the RAD51 gene that were identified in patients with FANCR by Ameziane et al. (2015) and Wang et al. (2015) occurred de novo.


Molecular Genetics

In a patient with FANCR, Ameziane et al. (2015) identified a de novo heterozygous missense mutation in the RAD51 gene (A293T; 179617.0005). The mutation was found by whole-genome sequencing and confirmed by Sanger sequencing. In vitro functional expression assays showed that the mutant protein reduced the formation of D-loop intermediates, which measures homology-dependent joint molecule formation during DNA repair by homologous recombination. Biochemical studies showed that the mutation impairs the binding of RAD51 to single- and double-stranded DNA and attenuates the DNA-stimulated ATPase activity of RAD51. The mutant protein was unable to form proper and functional nucleoprotein filaments, and acted in a dominant-negative manner when coexpressed with the wildtype protein.

In a girl with FANCR, Wang et al. (2015) identified a de novo heterozygous missense mutation in the RAD51 gene (T131P; 179617.0007). The mutation was found by whole-exome sequencing.


REFERENCES

  1. Ameziane, N., May, P., Haitjema, A., van de Vrugt, H. J., van Rossum-Fikket, S. E., Ristc, D., Williams, G. J., Balk, J., Rockx, D., Li, H., Rooimans, M. A., Oostra, A. B., and 17 others. A novel Fanconi anaemia subtype associated with a dominant-negative mutation in RAD51. Nature Commun. 6: 8829, 2015. Note: Electronic Article. [PubMed: 26681308] [Full Text: https://doi.org/10.1038/ncomms9829]

  2. Wang, A. T., Kim, T., Wagner, J. E., Conti, B. A., Lach, F. P., Huang, A. L., Molina, H., Sanborn, E. M., Zierhut, H., Cornes, B. K., Abhyankar, A., Sougnez, C., Gabriel, S. B., Auerbach, A. D., Kowalczykowski, S. C., Smogorzewska, A. A dominant mutation in human RAD51 reveals its function in DNA interstrand crosslink repair independent of homologous recombination. Molec. Cell 59: 478-490, 2015. [PubMed: 26253028] [Full Text: https://doi.org/10.1016/j.molcel.2015.07.009]


Contributors:
Cassandra L. Kniffin - updated : 06/07/2020

Creation Date:
Cassandra L. Kniffin : 12/07/2016

Edit History:
carol : 06/11/2020
carol : 06/10/2020
ckniffin : 06/07/2020
carol : 12/09/2016
ckniffin : 12/08/2016