Entry - *603702 - RIBOSOMAL PROTEIN S27; RPS27 - OMIM
 
* 603702

RIBOSOMAL PROTEIN S27; RPS27


Alternative titles; symbols

METALLOPANSTIMULIN 1; MPS1


HGNC Approved Gene Symbol: RPS27

Cytogenetic location: 1q21.3   Genomic coordinates (GRCh38) : 1:153,990,762-153,992,155 (from NCBI)


Gene-Phenotype Relationships
Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
1q21.3 ?Diamond-Blackfan anemia 17 617409 AD 3

TEXT

Cloning and Expression

The mammalian ribosome is composed of 4 RNA species (see 180450) and approximately 80 different proteins. Using differential hybridization to screen a cDNA library derived from a human mammary carcinoma cell line that was stimulated with TGFB1 (190180) in the presence of cyclohexamide, Fernandez-Pol et al. (1993) isolated a cDNA whose corresponding mRNA was induced by TGFB1. The deduced protein, which the authors named metallopanstimulin-1 (MPS1), has 84 amino acids and an unmodified molecular mass of 9.5 kD. The MPS1 protein contains a predicted zinc finger domain of the C4 type. Immunofluorescence demonstrated that MPS1 is located predominantly in the nucleus. Northern blot analysis detected an approximately 0.4-kb MPS1 transcript which was induced by a variety of growth factors. MPS1 mRNA levels were increased in cultured malignant cells and in cancerous tissue specimens compared to cultured normal cells and normal tissue specimens, respectively.

Tsui et al. (1996) cloned a human heart cDNA encoding ribosomal protein S27 (RPS27). The deduced human RPS27 protein is 96% identical to the rat Rps27 protein. The RPS27 and MPS1 cDNAs differ by 1 bp; whereas MPS1 contains the putative polyadenylation signal AACAAA, RPS27 contains AATAAA.


Mapping

By somatic cell hybrid and radiation hybrid mapping analyses, Kenmochi et al. (1998) mapped the RPS27 gene to chromosome 1.


Gene Function

Fernandez-Pol et al. (1994) showed that recombinant MPS1 expressed in the Sf9 insect cell line was phosphorylated and can bind to DNA.

In cells from the K562 human erythroid cell line, Wang et al. (2015) knocked down RPS27 by siRNA and analyzed pre-rRNA processing by Northern blot analysis. Reduction of RPS27 resulted in accumulation of 30S rRNA and a decrease in 21S rRNA and 18S-E rRNA, suggesting that RPS27 is essential for 18S rRNA processing.


Molecular Genetics

In a 4-year-old girl with Diamond-Blackfan anemia-17 (DBA17; 617409), Wang et al. (2015) identified heterozygosity for a de novo 1-bp deletion in the RPS27 gene (603702.0001).


Animal Model

After morpholino knockdown of the zebrafish gene rps27.1, which shares 96% amino acid identity with human RPS27, Wang et al. (2015) observed abnormal morphant phenotypes such as a thin yolk sac extension, bent tail, and malformed brain region at 26 hours postfertilization (hpf). Reduced erythrocyte production was also observed in approximately 60% of the morphants.


ALLELIC VARIANTS ( 1 Selected Example):

.0001 DIAMOND-BLACKFAN ANEMIA 17 (1 patient)

RPS27, 1-BP DEL, 90C
  
RCV000477728

In a 4-year-old girl (patient 42) with Diamond-Blackfan anemia-17 (DBA17; 617409), Wang et al. (2015) identified heterozygosity for a de novo 1-bp deletion (c.90delC) in the RPS27 gene, causing a frameshift predicted to result in a premature termination codon (Tyr31ThrfsTer5).


REFERENCES

  1. Fernandez-Pol, J. A., Klos, D. J., Hamilton, P. D. A growth factor-inducible gene encodes a novel nuclear protein with zinc finger structure. J. Biol. Chem. 268: 21198-21204, 1993. [PubMed: 8407955, related citations]

  2. Fernandez-Pol, J. A., Klos, D. J., Hamilton, P. D. Metallopanstimulin gene product produced in a baculovirus expression system is a nuclear phosphoprotein that binds to DNA. Cell Growth Diff. 5: 811-825, 1994. [PubMed: 7986747, related citations]

  3. Kenmochi, N., Kawaguchi, T., Rozen, S., Davis, E., Goodman, N., Hudson, T. J., Tanaka, T., Page, D. C. A map of 75 human ribosomal protein genes. Genome Res. 8: 509-523, 1998. [PubMed: 9582194, related citations] [Full Text]

  4. Tsui, S. K. W., Lee, S. M. Y., Fung, K. P., Waye, M. M. Y., Lee, C. Y. Primary structures and sequence analysis of human ribosomal proteins L39 and S27. Biochem. Molec. Biol. Int. 40: 611-616, 1996. [PubMed: 8908372, related citations] [Full Text]

  5. Wang, R., Yoshida, K., Toki, T., Sawada, T., Uechi, T., Okuno, Y., Sato-Otsubo, A., Kudo, K., Kamimaki, I., Kanezaki, R., Shiraishi, Y., Chiba, K., and 21 others. Loss of function mutations in RPL27 and RPS27 identified by whole exome sequencing in Diamond-Blackfan anaemia. Brit. J. Haemat. 168: 854-864, 2015. [PubMed: 25424902, related citations] [Full Text]


Contributors:
Marla J. F. O'Neill - updated : 03/28/2017
Creation Date:
Patti M. Sherman : 4/6/1999
carol : 03/28/2017
carol : 04/16/1999

* 603702

RIBOSOMAL PROTEIN S27; RPS27


Alternative titles; symbols

METALLOPANSTIMULIN 1; MPS1


HGNC Approved Gene Symbol: RPS27

Cytogenetic location: 1q21.3   Genomic coordinates (GRCh38) : 1:153,990,762-153,992,155 (from NCBI)


Gene-Phenotype Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
1q21.3 ?Diamond-Blackfan anemia 17 617409 Autosomal dominant 3

TEXT

Cloning and Expression

The mammalian ribosome is composed of 4 RNA species (see 180450) and approximately 80 different proteins. Using differential hybridization to screen a cDNA library derived from a human mammary carcinoma cell line that was stimulated with TGFB1 (190180) in the presence of cyclohexamide, Fernandez-Pol et al. (1993) isolated a cDNA whose corresponding mRNA was induced by TGFB1. The deduced protein, which the authors named metallopanstimulin-1 (MPS1), has 84 amino acids and an unmodified molecular mass of 9.5 kD. The MPS1 protein contains a predicted zinc finger domain of the C4 type. Immunofluorescence demonstrated that MPS1 is located predominantly in the nucleus. Northern blot analysis detected an approximately 0.4-kb MPS1 transcript which was induced by a variety of growth factors. MPS1 mRNA levels were increased in cultured malignant cells and in cancerous tissue specimens compared to cultured normal cells and normal tissue specimens, respectively.

Tsui et al. (1996) cloned a human heart cDNA encoding ribosomal protein S27 (RPS27). The deduced human RPS27 protein is 96% identical to the rat Rps27 protein. The RPS27 and MPS1 cDNAs differ by 1 bp; whereas MPS1 contains the putative polyadenylation signal AACAAA, RPS27 contains AATAAA.


Mapping

By somatic cell hybrid and radiation hybrid mapping analyses, Kenmochi et al. (1998) mapped the RPS27 gene to chromosome 1.


Gene Function

Fernandez-Pol et al. (1994) showed that recombinant MPS1 expressed in the Sf9 insect cell line was phosphorylated and can bind to DNA.

In cells from the K562 human erythroid cell line, Wang et al. (2015) knocked down RPS27 by siRNA and analyzed pre-rRNA processing by Northern blot analysis. Reduction of RPS27 resulted in accumulation of 30S rRNA and a decrease in 21S rRNA and 18S-E rRNA, suggesting that RPS27 is essential for 18S rRNA processing.


Molecular Genetics

In a 4-year-old girl with Diamond-Blackfan anemia-17 (DBA17; 617409), Wang et al. (2015) identified heterozygosity for a de novo 1-bp deletion in the RPS27 gene (603702.0001).


Animal Model

After morpholino knockdown of the zebrafish gene rps27.1, which shares 96% amino acid identity with human RPS27, Wang et al. (2015) observed abnormal morphant phenotypes such as a thin yolk sac extension, bent tail, and malformed brain region at 26 hours postfertilization (hpf). Reduced erythrocyte production was also observed in approximately 60% of the morphants.


ALLELIC VARIANTS 1 Selected Example):

.0001   DIAMOND-BLACKFAN ANEMIA 17 (1 patient)

RPS27, 1-BP DEL, 90C
SNP: rs1085307115, ClinVar: RCV000477728

In a 4-year-old girl (patient 42) with Diamond-Blackfan anemia-17 (DBA17; 617409), Wang et al. (2015) identified heterozygosity for a de novo 1-bp deletion (c.90delC) in the RPS27 gene, causing a frameshift predicted to result in a premature termination codon (Tyr31ThrfsTer5).


REFERENCES

  1. Fernandez-Pol, J. A., Klos, D. J., Hamilton, P. D. A growth factor-inducible gene encodes a novel nuclear protein with zinc finger structure. J. Biol. Chem. 268: 21198-21204, 1993. [PubMed: 8407955]

  2. Fernandez-Pol, J. A., Klos, D. J., Hamilton, P. D. Metallopanstimulin gene product produced in a baculovirus expression system is a nuclear phosphoprotein that binds to DNA. Cell Growth Diff. 5: 811-825, 1994. [PubMed: 7986747]

  3. Kenmochi, N., Kawaguchi, T., Rozen, S., Davis, E., Goodman, N., Hudson, T. J., Tanaka, T., Page, D. C. A map of 75 human ribosomal protein genes. Genome Res. 8: 509-523, 1998. [PubMed: 9582194] [Full Text: https://doi.org/10.1101/gr.8.5.509]

  4. Tsui, S. K. W., Lee, S. M. Y., Fung, K. P., Waye, M. M. Y., Lee, C. Y. Primary structures and sequence analysis of human ribosomal proteins L39 and S27. Biochem. Molec. Biol. Int. 40: 611-616, 1996. [PubMed: 8908372] [Full Text: https://doi.org/10.1080/15216549600201203]

  5. Wang, R., Yoshida, K., Toki, T., Sawada, T., Uechi, T., Okuno, Y., Sato-Otsubo, A., Kudo, K., Kamimaki, I., Kanezaki, R., Shiraishi, Y., Chiba, K., and 21 others. Loss of function mutations in RPL27 and RPS27 identified by whole exome sequencing in Diamond-Blackfan anaemia. Brit. J. Haemat. 168: 854-864, 2015. [PubMed: 25424902] [Full Text: https://doi.org/10.1111/bjh.13229]


Contributors:
Marla J. F. O'Neill - updated : 03/28/2017

Creation Date:
Patti M. Sherman : 4/6/1999

Edit History:
carol : 03/28/2017
carol : 04/16/1999