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LOC4332081 SEC14 cytosolic factor [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4332081, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4332081
Gene description
SEC14 cytosolic factor
Locus tag
OSNPB_030219100
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC4332081 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (6312255..6315341)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (6264775..6267856)

Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene protein OBERON 4 Neighboring gene sugar transport protein MST4-like Neighboring gene heat shock 70 kDa protein 8 Neighboring gene superoxide dismutase [Cu-Zn] 2 Neighboring gene tubulin alpha-2 chain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
SEC14 cytosolic factor
Names
Os03g0219100

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

    Range
    6312255..6315341
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015773702.3 → XP_015629188.1  SEC14 cytosolic factor

    UniProtKB/TrEMBL
    B8AQU9, B9F687, Q0DTX6, Q10PW5
    Conserved Domains (2) summary
    smart01100
    Location:12 → 59
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
    cd00170
    Location:84 → 196
    SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...
Nucleotide Protein
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