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LOC401703 U2 small nuclear RNA auxiliary factor 1 like 4 pseudogene [ Homo sapiens (human) ]

Gene ID: 401703, updated on 4-Mar-2025

Summary

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Gene symbol
LOC401703
Gene description
U2 small nuclear RNA auxiliary factor 1 like 4 pseudogene
See related
Ensembl:ENSG00000213365
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC401703 in Genome Data Viewer
Location:
11q13.4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (72280151..72281107)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (72206642..72207598)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (71991195..71992151)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3718 Neighboring gene inositol polyphosphate phosphatase like 1 Neighboring gene paired like homeobox 2A Neighboring gene dedicator of cytokinesis 1 pseudogene Neighboring gene uncharacterized LOC124902708 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr11:72012242-72013441 Neighboring gene ReSE screen-validated silencer GRCh37_chr11:72019508-72019989 Neighboring gene ClpB family mitochondrial disaggregase Neighboring gene Sharpr-MPRA regulatory region 1135 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:72026127-72026628 Neighboring gene uncharacterized LOC112268077

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_030261.1 

    Range
    101..1057
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    72280151..72281107
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    72206642..72207598
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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