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LOC112268077 uncharacterized LOC112268077 [ Homo sapiens (human) ]

Gene ID: 112268077, updated on 4-Mar-2025

Summary

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Gene symbol
LOC112268077
Gene description
uncharacterized LOC112268077
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC112268077 in Genome Data Viewer
Location:
11q13.4
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (72351379..72363455)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (72277840..72289908)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene U2 small nuclear RNA auxiliary factor 1 like 4 pseudogene Neighboring gene uncharacterized LOC124902708 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr11:72012242-72013441 Neighboring gene ReSE screen-validated silencer GRCh37_chr11:72019508-72019989 Neighboring gene ClpB family mitochondrial disaggregase Neighboring gene Sharpr-MPRA regulatory region 1135 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:72026127-72026628 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5185 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5188 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5187 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5186 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5189 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5190 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr11:72129073-72129760 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:72129761-72130448 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:72130449-72131135 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr11:72131818-72133017 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5191 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:72145720-72146526 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3719 Neighboring gene ADP-ribosyltransferase 2B, pseudogene Neighboring gene ADP-ribosyltransferase 2, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    72351379..72363455
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_002957257.2 RNA Sequence

  2. XR_007062768.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    72277840..72289908
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007082286.1 RNA Sequence

  2. XR_007082285.1 RNA Sequence

Nucleotide Protein
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