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LOC107986776 uncharacterized LOC107986776 [ Homo sapiens (human) ]

Gene ID: 107986776, updated on 4-Mar-2025

Summary

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Gene symbol
LOC107986776
Gene description
uncharacterized LOC107986776
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC107986776 in Genome Data Viewer
Location:
7p15.3
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (22874691..22891423, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (23011284..23028015, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:22861949-22862709 Neighboring gene uncharacterized LOC112267993 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:22883323-22883823 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18004 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:22894231-22894842 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr7:22898129-22899328 Neighboring gene small nucleolar RNA, C/D box 93 Neighboring gene small nucleolar RNA host gene 26 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25712 Neighboring gene uncharacterized LOC124901600 Neighboring gene ribosomal protein L12 pseudogene 10 Neighboring gene hyccin PI4KA lipid kinase complex subunit 1 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr7:23028535-23029046 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr7:23029047-23029557 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25713 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:23052451-23053132 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18005 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25714 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25715 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr7:23060419-23061618 Neighboring gene uncharacterized LOC105375185

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    22874691..22891423 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001745119.2 RNA Sequence

  2. XR_007060249.1 RNA Sequence

  3. XR_007060250.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    23011284..23028015 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007078308.1 RNA Sequence

  2. XR_007078309.1 RNA Sequence

  3. XR_007078310.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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