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LOC107986432 uncharacterized LOC107986432 [ Homo sapiens (human) ]

Gene ID: 107986432, updated on 4-Mar-2025

Summary

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Gene symbol
LOC107986432
Gene description
uncharacterized LOC107986432
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC107986432 in Genome Data Viewer
Location:
5q14.3
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (91151822..91265273, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (91637735..91749455, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene adhesion G protein-coupled receptor V1 Neighboring gene uncharacterized LOC105379077 Neighboring gene NANOG hESC enhancer GRCh37_chr5:90033573-90034074 Neighboring gene MPRA-validated peak5350 silencer Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 5:90190300 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 5:90212892 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:90225253-90225805 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 5:90264394 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 5:90266068 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 5:90269376 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 5:90272756 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 5:90276298 Neighboring gene Sharpr-MPRA regulatory region 3426 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 5:90277863 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 5:90277675 Neighboring gene LYSET pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22783 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22784 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:90496731-90496943 Neighboring gene uncharacterized LOC107986433 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22785 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:90575335-90576276 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:90576277-90577218 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr5:90607093-90608292 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr5:90609644-90610843 Neighboring gene RNA, U4 small nuclear 90, pseudogene Neighboring gene lung cancer associated transcript 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    91151822..91265273 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001742795.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    91637735..91749455 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007075782.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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