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LOC107984615 uncharacterized LOC107984615 [ Homo sapiens (human) ]

Gene ID: 107984615, updated on 4-Mar-2025

Summary

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Gene symbol
LOC107984615
Gene description
uncharacterized LOC107984615
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC107984615 in Genome Data Viewer
Location:
13q33.1
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (102278288..102312824)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (101494302..101528845)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene fibroblast growth factor 14 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:102720635-102721136 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:102721137-102721636 Neighboring gene microRNA 4705 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr13:102844049-102845248 Neighboring gene ribosomal protein L39 pseudogene 29 Neighboring gene FGF14 intronic transcript 1 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr13:102985874-102986457 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:103004521-103005022 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7964 Neighboring gene FGF14 antisense RNA 1 Neighboring gene FGF14 antisense RNA 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    102278288..102312824
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007063856.1 RNA Sequence

  2. XR_001750082.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    101494302..101528845
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007083642.1 RNA Sequence

  2. XR_007083643.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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