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LOC107983981 uncharacterized LOC107983981 [ Homo sapiens (human) ]

Gene ID: 107983981, updated on 4-Mar-2025

Summary

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Gene symbol
LOC107983981
Gene description
uncharacterized LOC107983981
See related
Ensembl:ENSG00000259237
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC107983981 in Genome Data Viewer
Location:
15q21.3
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (52803752..53221654)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (50612033..51030079)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9437 Neighboring gene Sharpr-MPRA regulatory region 217 Neighboring gene uncharacterized LOC105370824 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:53082820-53083588 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:53083589-53084356 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:53086613-53087310 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:53087311-53088006 Neighboring gene uncharacterized LOC101928499 Neighboring gene one cut homeobox 1 Neighboring gene ribosomal protein SA pseudogene 55 Neighboring gene eukaryotic translation elongation factor 1 alpha 1 pseudogene 22 Neighboring gene Sharpr-MPRA regulatory region 2235 Neighboring gene uncharacterized LOC105370823 Neighboring gene long intergenic non-protein coding RNA 2490 Neighboring gene Sharpr-MPRA regulatory region 13260 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr15:53599743-53600942 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr15:53604840-53605570 Neighboring gene uncharacterized LOC105370826 Neighboring gene NANOG hESC enhancer GRCh37_chr15:53740354-53740863 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_39776 Neighboring gene WD repeat domain 72 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr15:53917398-53918006 Neighboring gene RNA, U2 small nuclear 53, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    52803752..53221654
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004837530.2 RNA Sequence

  2. XR_932257.3 RNA Sequence

  3. XR_004837531.2 RNA Sequence

  4. XR_007064641.1 RNA Sequence

    Related
    ENST00000780970.1

  5. XR_004837529.2 RNA Sequence

  6. XR_007064642.1 RNA Sequence

  7. XR_001751548.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    50612033..51030079
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007085312.1 RNA Sequence

  2. XR_007085309.1 RNA Sequence

  3. XR_007085310.1 RNA Sequence

  4. XR_007085311.1 RNA Sequence

  5. XR_007085313.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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