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LOC105375377 uncharacterized LOC105375377 [ Homo sapiens (human) ]

Gene ID: 105375377, updated on 4-Mar-2025

Summary

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Gene symbol
LOC105375377
Gene description
uncharacterized LOC105375377
See related
Ensembl:ENSG00000308903
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105375377 in Genome Data Viewer
Location:
7q21.11
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (83168182..83175460, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (84419405..84426683, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105375376 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26213 Neighboring gene NANOG hESC enhancer GRCh37_chr7:82389227-82389837 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr7:82434470-82435669 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:82445473-82446018 Neighboring gene piccolo presynaptic cytomatrix protein Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:82653064-82653634 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:82653635-82654203 Neighboring gene RNA, 5S ribosomal pseudogene 235 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18336 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26214 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:82833944-82834566 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:82840511-82841088 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:82841089-82841665 Neighboring gene semaphorin 3E Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:83088278-83089221 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:83089222-83090164 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr7:83093938-83094880 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26215 Neighboring gene uncharacterized LOC105375378 Neighboring gene NANOG hESC enhancer GRCh37_chr7:83126208-83126709 Neighboring gene RAD23B pseudogene 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    83168182..83175460 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_927715.2 RNA Sequence

    Related
    ENST00000837169.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    84419405..84426683 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007077667.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials