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LOC105371268 uncharacterized LOC105371268 [ Homo sapiens (human) ]

Gene ID: 105371268, updated on 4-Mar-2025

Summary

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Gene symbol
LOC105371268
Gene description
uncharacterized LOC105371268
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105371268 in Genome Data Viewer
Location:
16q12.2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (53510284..53519557, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (59308080..59317352, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene RNA, U6 small nuclear 1153, pseudogene Neighboring gene RB transcriptional corepressor like 2 Neighboring gene H3K27ac hESC enhancer GRCh37_chr16:53536317-53536818 Neighboring gene H3K27ac hESC enhancer GRCh37_chr16:53536819-53537318 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10843 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7500 Neighboring gene uncharacterized LOC124903690 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10844 Neighboring gene AKT interacting protein Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10845 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10846 Neighboring gene uncharacterized LOC105371269 Neighboring gene NANOG hESC enhancer GRCh37_chr16:53580827-53581328 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr16:53594743-53595365 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr16:53595366-53595988 Neighboring gene ReSE screen-validated silencer GRCh37_chr16:53610651-53610873 Neighboring gene RPGRIP1 like Neighboring gene NANOG hESC enhancer GRCh37_chr16:53659615-53660133 Neighboring gene VISTA enhancer hs59 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7502 Neighboring gene H3K27ac hESC enhancer GRCh37_chr16:53737766-53738266

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    53510284..53519557 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001752188.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    59308080..59317352 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007086365.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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