U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Gm31340 predicted gene, 31340 [ Mus musculus (house mouse) ]

Gene ID: 102633537, updated on 22-Oct-2024

Summary

Go to the top of the page Help
Official Symbol
Gm31340provided by MGI
Official Full Name
predicted gene, 31340provided by MGI
Primary source
MGI:MGI:5590499
See related
Ensembl:ENSMUSG00000125894 AllianceGenome:MGI:5590499
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Gm31340 in Genome Data Viewer
Location:
15 A1; 15
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (8740510..8893994)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (8711026..8864483)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 46508 Neighboring gene STARR-positive B cell enhancer ABC_E7359 Neighboring gene STARR-seq mESC enhancer starr_37907 Neighboring gene solute carrier family 1 (glial high affinity glutamate transporter), member 3 Neighboring gene STARR-seq mESC enhancer starr_37908 Neighboring gene STARR-seq mESC enhancer starr_37909 Neighboring gene predicted gene, 57815 Neighboring gene STARR-seq mESC enhancer starr_37913 Neighboring gene STARR-seq mESC enhancer starr_37914 Neighboring gene STARR-seq mESC enhancer starr_37917 Neighboring gene STARR-seq mESC enhancer starr_37918 Neighboring gene myotubularin related protein 3 pseudogene Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    8740510..8893994
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_383822.3 RNA Sequence

    Related
    ENSMUST00000273023.1

  2. XR_875029.4 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.