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SAMD11P1 sterile alpha motif domain containing 11 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 100421331, updated on 4-Mar-2025

Summary

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Official Symbol
SAMD11P1provided by HGNC
Official Full Name
sterile alpha motif domain containing 11 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:44473
See related
Ensembl:ENSG00000262480 AllianceGenome:HGNC:44473
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See SAMD11P1 in Genome Data Viewer
Location:
17p13.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (2613282..2613969, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (2502471..2503158, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (2516576..2517263, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene RNA, 7SL, cytoplasmic 33, pseudogene Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:2496154-2496882 Neighboring gene eukaryotic translation initiation factor 4A1 pseudogene 9 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8006 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8007 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8008 Neighboring gene Sharpr-MPRA regulatory region 7021 Neighboring gene platelet activating factor acetylhydrolase 1b regulatory subunit 1 Neighboring gene small nucleolar RNA U13 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:2562337-2562838 Neighboring gene RNA, 7SL, cytoplasmic 608, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Homology

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_026140.1 

    Range
    101..788
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    2613282..2613969 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    2502471..2503158 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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