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CALM2P1 calmodulin 2 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 100128390, updated on 4-Mar-2025

Summary

Official Symbol
CALM2P1provided by HGNC
Official Full Name
calmodulin 2 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:1446
See related
AllianceGenome:HGNC:1446
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See CALM2P1 in Genome Data Viewer
Location:
17q24.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (70241255..70242378)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (71119461..71120584)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (68237396..68238519)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8907 Neighboring gene KCNJ2 antisense RNA 1 Neighboring gene potassium inwardly rectifying channel subfamily J member 2 Neighboring gene NANOG hESC enhancer GRCh37_chr17:68289713-68290214 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12661 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr17:68362434-68363035 Neighboring gene uncharacterized LOC124904100 Neighboring gene MPRA-validated peak2978 silencer Neighboring gene ReSE screen-validated silencer GRCh37_chr17:68532725-68532826 Neighboring gene F2 enhancer upstream of SOX9 Neighboring gene uncharacterized LOC105371884

Genomic regions, transcripts, and products

Phenotypes

EBI GWAS Catalog

Description
Genetic variation in prostate-specific antigen-detected prostate cancer and the effect of control selection on genetic association studies.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002716.7 

    Range
    101..1224
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    70241255..70242378
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    71119461..71120584
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)