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dbVar

Database of genomic structural variation

nsv4426770

Organism: Homo sapiens

Study:nstd174 (DGV Gold Standard)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:218

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 303 SVs from 17 studies. See in: genome view

Remapped(Score: Perfect):56,858,326-56,858,543

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv4426770	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000024.10	ChrY	56,858,326	56,858,335	56,858,523	56,858,543
nsv4426770	Remapped	Perfect	GRCh38.p12	PATCHES	Second Pass	NW_009646209.1	ChrY\|NW_00 9646209.1	71,574	71,583	71,771	71,791
nsv4426770	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000024.9	ChrY	59,004,473	59,004,482	59,004,670	59,004,690

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv15745521	copy number loss	Multiple	Multiple

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv15745521	Remapped	Perfect	NW_009646209.1:g.( 71574_71583)_(7177 1_71791)del	GRCh38.p12	Second Pass	NW_009646209.1	ChrY\|NW_00 9646209.1	71,574	71,583	71,771	71,791
nssv15745521	Remapped	Perfect	NC_000024.10:g.(56 858326_56858335)_( 56858523_56858543) del	GRCh38.p12	First Pass	NC_000024.10	ChrY	56,858,326	56,858,335	56,858,523	56,858,543
nssv15745521	Submitted genomic		NC_000024.9:g.(590 04473_59004482)_(5 9004670_59004690)d el	GRCh37 (hg19)		NC_000024.9	ChrY	59,004,473	59,004,482	59,004,670	59,004,690

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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