nsv3167923
- Organism: Homo sapiens
- Study:nstd158 (Cleal et al. 2019)
- Variant Type:translocation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Cleal et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 68 SVs from 22 studies. See in: genome view
Overlapping variant regions from other studies: 1 SVs from 1 studies. See in: genome view
Overlapping variant regions from other studies: 68 SVs from 22 studies. See in: genome view
Overlapping variant regions from other studies: 10 SVs from 4 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
|---|---|---|---|---|---|---|---|---|---|---|
| nsv3167923 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 43,661,529 (-624, +624) | 43,661,529 (-624, +624) | + |
| nsv3167923 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NT_167214.1 | Unplaced|N T_167214.1 | 145,475 (-624, +624) | 145,475 (-624, +624) | - |
| nsv3167923 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000007.13 | Chr7 | 43,701,128 (-624, +624) | 43,701,128 (-624, +624) | + | ||
| nsv3167923 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NT_167214.1 | Unplaced|N T_167214.1 | 145,475 (-624, +624) | 145,475 (-624, +624) | - |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14240382 | interchromosomal translocation | DB76 | Sequencing | Paired-end mapping | 20 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
|---|---|---|---|---|---|---|---|---|---|
| nssv14240382 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 43,661,529 (-624, +624) | 43,661,529 (-624, +624) | + |
| nssv14240382 | Remapped | Perfect | GRCh38.p12 | First Pass | NT_167214.1 | Unplaced|N T_167214.1 | 145,475 (-624, +624) | 145,475 (-624, +624) | - |
| nssv14240382 | Submitted genomic | GRCh37 (hg19) | NC_000007.13 | Chr7 | 43,701,128 (-624, +624) | 43,701,128 (-624, +624) | + | ||
| nssv14240382 | Submitted genomic | GRCh37 (hg19) | NT_167214.1 | Unplaced|N T_167214.1 | 145,475 (-624, +624) | 145,475 (-624, +624) | - |