nsv2790280
- Organism: Homo sapiens
- Study:nstd137 (Huddleston et al. 2016)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:GRCh38 (hg38)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:19,410
- Publication(s):Huddleston et al. 2016
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 559 SVs from 80 studies. See in: genome view
Overlapping variant regions from other studies: 557 SVs from 80 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv2790280 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000011.10 | Chr11 | 49,711,900 | 49,731,309 | ||
| nsv2790280 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 49,733,452 | 49,752,861 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv13708689 | inversion | SAMN02744161 | Sequencing | Local sequence assembly | 47 |
| nssv13711296 | inversion | SAMN03255769 | Sequencing | Local sequence assembly | 46 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv13708689 | Submitted genomic | NC_000011.10:g.497 11900_49731309inv | GRCh38 (hg38) | NC_000011.10 | Chr11 | 49,711,900 | 49,731,309 | ||
| nssv13711296 | Submitted genomic | NC_000011.10:g.497 11900_49731309inv | GRCh38 (hg38) | NC_000011.10 | Chr11 | 49,711,900 | 49,731,309 | ||
| nssv13708689 | Remapped | Perfect | NC_000011.9:g.4973 3452_49752861inv | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 49,733,452 | 49,752,861 |
| nssv13711296 | Remapped | Perfect | NC_000011.9:g.4973 3452_49752861inv | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 49,733,452 | 49,752,861 |