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dbVar

Database of genomic structural variation

esv3901672

Organism: Homo sapiens

Study:estd225 (Magnusson et al. 2016)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:933

Publication(s):Magnusson et al. 2016

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 283 SVs from 64 studies. See in: genome view

Remapped(Score: Perfect):56,500,592-56,501,524

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
esv3901672	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	56,500,592	56,501,524
esv3901672	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000015.9	Chr15	56,792,790	56,793,722

Variant Call Information

Variant Call ID	Type	Method	Analysis	Copy number
essv25822535	copy number loss	SNP array	SNP genotyping analysis	1

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
essv25822535	Remapped	Perfect	NC_000015.10:g.565 00592_56501524del	GRCh38.p12	First Pass	NC_000015.10	Chr15	56,500,592	56,501,524
essv25822535	Submitted genomic		NC_000015.9:g.5679 2790_56793722del	GRCh37 (hg19)		NC_000015.9	Chr15	56,792,790	56,793,722

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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