Pathogen.env.1.0

collected by	United States Food and Drug Administration \| Office of Regulatory Affairs \| Atlanta Human and Animal Food Laboratory (ATLHAF)
collection date	2023-11-28
geographic location	USA:CA
isolation source	soil
latitude and longitude	missing
strain	FDA1200089-S002-018
isolate name alias	CFSAN135543
Interagency Food Safety Analytics Collaboration (IFSAC) category	environmental
source type	environmental
project name	GenomeTrakr
environmental medium	soil [ENVO:00001998]
purpose of sampling	targeted surveillance/monitoring
sequenced by	United States Food and Drug Administration \| Office of Regulatory Affairs \| Atlanta Human and Animal Food Laboratory (ATLHAF)
attribute_package	environmental/food/other
ontological term	soil:ENVO_00001998
FDA_Lab_Id	1200089-S002-018
strain_original	FDA1200089-S002-018

Supplemental Content

Pathogen.env.1.0
Pathogen.env.1.0

biosample
Escherichia coli strain FDA1200089-S002-018, whole genome shotgun sequencing pro...
Escherichia coli strain FDA1200089-S002-018, whole genome shotgun sequencing project
gi|2637176863|gb|ABPNBH000000000.1| H010000000

Nucleotide
Escherichia coli strain FDA1200089-S002-017, whole genome shotgun sequencing pro...
Escherichia coli strain FDA1200089-S002-017, whole genome shotgun sequencing project
gi|2637176860|gb|ABPNBJ000000000.1| J010000000

Nucleotide
Escherichia coli strain FDA1200089-S002-019, whole genome shotgun sequencing pro...
Escherichia coli strain FDA1200089-S002-019, whole genome shotgun sequencing project
gi|2637176862|gb|ABPNBI000000000.1| I010000000

Nucleotide
Escherichia coli strain FDA1200089-S002-020, whole genome shotgun sequencing pro...
Escherichia coli strain FDA1200089-S002-020, whole genome shotgun sequencing project
gi|2637178377|gb|ABPNBL000000000.1| L010000000

Nucleotide

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