Pathogen: environmental/food/other sample from Esc... - BioSample - NCBI

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Pathogen: environmental/food/other sample from Escherichia coli O18:H7

Identifiers: BioSample: SAMN08395807; SRA: SRS2868598; CFSAN: CFSAN049658

Organism: Escherichia coli O18:H7
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli

Package: Pathogen: environmental/food/other; version 1.0

Attributes

isolate name alias	CFSAN049658,6294-06
strain	MOD1-EC5412
Interagency Food Safety Analytics Collaboration (IFSAC) category	veterinary clinical/research\| other animal
source type	animal
collection date	2006-03-22
geographic location	USA
host	Odocoileus virginianus
latitude and longitude	missing
collected by	Pennsylvania State University\| Escherichia coli Reference Center
host disease	missing
isolation source	intestine white-tailed deer
food product origin geographic location	USA:VA
project name	GenomeTrakr
sequenced by	Pennsylvania State University\| Escherichia coli Reference Center
attribute_package	environmental/food/other
ontological term	intestine:UBERON_0000160, odocoileus virginianus:NCBITAXON_9874, white-tailed deer:FOODON_03411537
PublicAccession	CFSAN049658
ProjectAccession	PRJNA230969
Species	coli
Genus	Escherichia

BioProject: PRJNA230969 Escherichia
Retrieve all samples from this project

Submission: FDA Center for Food Safety and Applied Nutrition, Edward Dudley; 2018-01-25

Accession:: SAMN08395807
ID:: 8395807

BioProject SRA Nucleotide

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Pathogen: environmental/food/other sample from Escherichia coli O18:H7
Pathogen: environmental/food/other sample from Escherichia coli O18:H7

biosample
Escherichia coli O18:H7 strain MOD1-EC5412, whole genome shotgun sequencing proj...
Escherichia coli O18:H7 strain MOD1-EC5412, whole genome shotgun sequencing project
gi|1829649999|gb|AASCBA000000000.1| A010000000

Nucleotide
Pathogen: environmental/food/other sample from Escherichia coli
Pathogen: environmental/food/other sample from Escherichia coli

biosample
Escherichia coli strain FDA1042727-004-007, whole genome shotgun sequencing proj...
Escherichia coli strain FDA1042727-004-007, whole genome shotgun sequencing project
gi|1829469379|gb|AARZZF000000000.1| F010000000

Nucleotide
Pathogen: clinical or host-associated sample from Escherichia coli O117
Pathogen: clinical or host-associated sample from Escherichia coli O117

biosample

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