Pathogen: environmental/food/other sample from Esc... - BioSample - NCBI

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Pathogen: environmental/food/other sample from Escherichia coli O8:H21

Identifiers: BioSample: SAMN08395800; SRA: SRS2868596; CFSAN: CFSAN049664

Organism: Escherichia coli O8:H21
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli

Package: Pathogen: environmental/food/other; version 1.0

Attributes

isolate name alias	CFSAN049664,W1-D8LN
strain	MOD1-EC5418
Interagency Food Safety Analytics Collaboration (IFSAC) category	veterinary clinical/research\| other animal
source type	animal
collection date	2007-04-19
geographic location	USA
host	Mus musculus
latitude and longitude	missing
collected by	Pennsylvania State University\| Escherichia coli Reference Center
host disease	missing
isolation source	intestine mouse
food product origin geographic location	USA:NY
project name	GenomeTrakr
sequenced by	Pennsylvania State University\| Escherichia coli Reference Center
attribute_package	environmental/food/other
ontological term	intestine:UBERON_0000160, mouse:NCIT_C14238
PublicAccession	CFSAN049664
ProjectAccession	PRJNA230969
Species	coli
Genus	Escherichia

BioProject: PRJNA230969 Escherichia
Retrieve all samples from this project

Submission: FDA Center for Food Safety and Applied Nutrition, Edward Dudley; 2018-01-25

Accession:: SAMN08395800
ID:: 8395800

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Pathogen: environmental/food/other sample from Escherichia coli O8:H21
Pathogen: environmental/food/other sample from Escherichia coli O8:H21

biosample
Escherichia coli O8:H21 strain MOD1-EC5418, whole genome shotgun sequencing proj...
Escherichia coli O8:H21 strain MOD1-EC5418, whole genome shotgun sequencing project
gi|1840527660|gb|AATPMW000000000.1| W010000000

Nucleotide
Pathogen: environmental/food/other sample from Escherichia coli O119
Pathogen: environmental/food/other sample from Escherichia coli O119

biosample
Escherichia coli O119 strain MOD1-EC5248, whole genome shotgun sequencing projec...
Escherichia coli O119 strain MOD1-EC5248, whole genome shotgun sequencing project
gi|1840527632|gb|AATPNA000000000.1| A010000000

Nucleotide
Pathogen: environmental/food/other sample from Escherichia coli O2
Pathogen: environmental/food/other sample from Escherichia coli O2

biosample

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