Pathogen: environmental/food/other sample from Esc... - BioSample - NCBI

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Pathogen: environmental/food/other sample from Escherichia coli O5

Identifiers: BioSample: SAMN08273757; SRA: SRS2799523; CFSAN: CFSAN049487

Organism: Escherichia coli O5
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli

Package: Pathogen: environmental/food/other; version 1.0

Attributes

isolate name alias	CFSAN049487,C000980444
strain	MOD1-EC5241
Interagency Food Safety Analytics Collaboration (IFSAC) category	veterinary clinical/research\| other animal
source type	animal
collection date	2000-04-20
geographic location	USA
host	Tragelaphus oryx
latitude and longitude	missing
collected by	Pennsylvania State University\| Escherichia coli Reference Center
host disease	missing
isolation source	antelope eland feces
food product origin geographic location	USA:TX
project name	GenomeTrakr
sequenced by	Pennsylvania State University\| Escherichia coli Reference Center
attribute_package	environmental/food/other
ontological term	antelope:FOODON_03411481, feces:UBERON_0001988, oryx:NCBITAXON_9957
PublicAccession	CFSAN049487
ProjectAccession	PRJNA230969
Species	coli
Genus	Escherichia

BioProject: PRJNA230969 Escherichia
Retrieve all samples from this project

Submission: FDA Center for Food Safety and Applied Nutrition, Edward Dudley; 2017-12-28

Accession:: SAMN08273757
ID:: 8273757

BioProject SRA Nucleotide

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Pathogen: environmental/food/other sample from Escherichia coli O5
Pathogen: environmental/food/other sample from Escherichia coli O5

biosample
Escherichia coli O5 strain MOD1-EC5241, whole genome shotgun sequencing project
Escherichia coli O5 strain MOD1-EC5241, whole genome shotgun sequencing project
gi|1831504704|gb|AASFWR000000000.1| R010000000

Nucleotide
Pathogen: environmental/food/other sample from Escherichia coli O88:H1
Pathogen: environmental/food/other sample from Escherichia coli O88:H1

biosample
Escherichia coli O88:H1 strain MOD1-EC6106, whole genome shotgun sequencing proj...
Escherichia coli O88:H1 strain MOD1-EC6106, whole genome shotgun sequencing project
gi|1831504707|gb|AASFWY000000000.1| Y010000000

Nucleotide
Pathogen: environmental/food/other sample from Escherichia coli O113
Pathogen: environmental/food/other sample from Escherichia coli O113

biosample

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