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Pathogen: environmental/food/other sample from Escherichia coli

Identifiers: BioSample: SAMN41136729; Sample name: 37f; SRA: SRS24220756

Organism: Escherichia coli
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia

Package: Pathogen: environmental/food/other; version 1.0

Attributes

isolate	37f fall
collected by	Damaris Krul, Danieli Conte and Bianca Negoseki
collection date	2023-06-19
geographic location	Brazil: Curitiba
isolation source	Hospital effluent
latitude and longitude	25.443 S 49.276 W

BioProjects: PRJNA785542
Retrieve all samples from this project

PRJNA514245
Retrieve all samples from this project

Submission: Instituto de Pesquisa Pele Pequeno Principe, Damaris Krul; 2024-04-30

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
cefotaxime	susceptible	==	1	mg/L	MIC			96-Well Plate	EUCAST
ceftazidime	susceptible-dose dependent	==	4	mg/L	MIC			96-Well Plate	EUCAST
cefepime	susceptible	==	1	mg/L	MIC			96-Well Plate	EUCAST
ertapenem	resistant	==	1	mg/L	MIC			96-Well Plate	EUCAST
imipenem	susceptible	==	4	mg/L	MIC			96-Well Plate	EUCAST
meropenem	susceptible	<=	0.25	mg/L	MIC			96-Well Plate	EUCAST
ciprofloxacin	susceptible	<=	0.016	mg/L	MIC			96-Well Plate	EUCAST
gentamicin	susceptible	==	1	mg/L	MIC			96-Well Plate	EUCAST
polymyxin B	susceptible	==	0.25	mg/L	MIC			96-Well Plate	EUCAST

Accession:: SAMN41136729
ID:: 41136729

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Pathogen: environmental/food/other sample from Escherichia coli
Pathogen: environmental/food/other sample from Escherichia coli

biosample
288601[BioProject] AND wgs master[prop] (30020)
Nucleotide
288601[BioProject] (30865)
Nucleotide
"pathogen cl 1 0"[filter] (1782782)
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