Salmonella enterica (ID 217342) - BioProject

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Accession: PRJNA217342 ID: 217342

Salmonella enterica

GenomeTrakr Project: Technology and Food Safety Services, Mexico

See Genome Information for Salmonella enterica

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This project is a component of the GenomeTrakr umbrella project for Salmonella enterica

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GenomeTrakr Project: Epidemiological Research Center at Sinaloa, Mexico

Accession	PRJNA217342
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Salmonella enterica[Taxonomy ID: 28901] Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Submission	Registration date: 12-Feb-2019 FDA/CFSAN
Related Resources	Website: Epidemiological Research Center at Sinaloa, Mexico TECSIA homepage
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	140
SRA Experiments	249
Other datasets
BioSample	332
Assembly	140

Assembly details:

Download

Assembly level

Number of Assemblies

Contig

Total

139
139

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_004222125.1	AAACTT000000000	SAMN03464421	CFSAN024486	Salmonella enterica subsp. enterica serovar Berta
GCA_004288875.1	AAACSX000000000	SAMN03464548	CFSAN024613	Salmonella enterica subsp. enterica serovar Thompson
GCA_006090495.1	AAEOFG000000000	SAMN03464494	CFSAN024559	Salmonella enterica
GCA_006089435.1	AAEODL000000000	SAMN03464547	CFSAN024612	Salmonella enterica
GCA_006093675.1	AAEOLF000000000	SAMN03464460	CFSAN024525	Salmonella enterica
GCA_005958365.1	AAEEMP000000000	SAMN03464453	CFSAN024518	Salmonella enterica
GCA_005958225.1	AAEEMO000000000	SAMN03464455	CFSAN024520	Salmonella enterica
GCA_006344815.1	AAFFGW000000000	SAMN02335410	CFSAN006272	Salmonella enterica subsp. enterica
GCA_005756575.1	AADTHC000000000	SAMN03464458	CFSAN024523	Salmonella enterica
GCA_007473935.1	AAIBDV000000000	SAMN03464429	CFSAN024494	Salmonella enterica
GCA_007472675.1	AAIBEI000000000	SAMN03464468	CFSAN024533	Salmonella enterica subsp. enterica
GCA_007549135.1	AAIGSE000000000	SAMN03464466	CFSAN024531	Salmonella enterica
GCA_007549115.1	AAIGSC000000000	SAMN03464539	CFSAN024604	Salmonella enterica subsp. salamae
GCA_007548395.1	AAIGQG000000000	SAMN02335409	CFSAN006271	Salmonella enterica subsp. enterica serovar Javiana
GCA_007627755.1	AAIMAL000000000	SAMN02335411	CFSAN006273	Salmonella enterica subsp. enterica serovar Javiana
GCA_007750035.1	AAITPB000000000	SAMN02335408	CFSAN006270	Salmonella enterica subsp. enterica serovar Javiana
GCA_007751235.1	AAITQH000000000	SAMN03464485	CFSAN024550	Salmonella enterica subsp. enterica serovar Agona
GCA_007751215.1	AAITQJ000000000	SAMN02335412	CFSAN006274	Salmonella enterica subsp. enterica serovar Javiana
GCA_007757095.1	AAIUBT000000000	SAMN03464454	CFSAN024519	Salmonella enterica subsp. enterica serovar Muenchen
GCA_007757075.1	AAIUBZ000000000	SAMN03464475	CFSAN024540	Salmonella enterica subsp. enterica serovar Newport
GCA_007756975.1	AAIUBX000000000	SAMN03464487	CFSAN024552	Salmonella enterica
GCA_007757775.1	AAIUBU000000000	SAMN03464463	CFSAN024528	Salmonella enterica subsp. diarizonae
GCA_007758375.1	AAIUCZ000000000	SAMN02335406	CFSAN006268	Salmonella enterica subsp. enterica serovar Javiana
GCA_007815855.1	AAIYEO000000000	SAMN03464489	CFSAN024554	Salmonella enterica subsp. enterica serovar Newport
GCA_007906965.1	AAJDVY000000000	SAMN02335377	CFSAN006239	Salmonella enterica subsp. enterica serovar Javiana
GCA_006519555.1	AAFNKD000000000	SAMN03464504	CFSAN024569	Salmonella enterica subsp. houtenae serovar O:11:g,z25:-
GCA_006518655.1	AAFNJX000000000	SAMN03464519	CFSAN024584	Salmonella enterica subsp. houtenae serovar O:11:g,z25:-
GCA_006634185.1	AAFVHE000000000	SAMN03464542	CFSAN024607	Salmonella enterica subsp. enterica serovar Newport
GCA_006633965.1	AAFVGF000000000	SAMN03464529	CFSAN024594	Salmonella enterica subsp. enterica serovar Newport
GCA_006863225.1	AAGLQF000000000	SAMN02335369	CFSAN006231	Salmonella enterica subsp. salamae
GCA_006872255.1	AAGMFR000000000	SAMN03464546	CFSAN024611	Salmonella enterica
GCA_006889345.1	AAGNLL000000000	SAMN03464461	CFSAN024526	Salmonella enterica
GCA_006887835.1	AAGNKI000000000	SAMN03464462	CFSAN024527	Salmonella enterica
GCA_006883525.1	AAGMLO000000000	SAMN03464464	CFSAN024529	Salmonella enterica
GCA_006883365.1	AAGMLJ000000000	SAMN03464470	CFSAN024535	Salmonella enterica
GCA_007189315.1	AAHGPF000000000	SAMN03464483	CFSAN024548	Salmonella enterica subsp. enterica serovar Anatum
GCA_007237195.1	AAHKBV000000000	SAMN02335388	CFSAN006250	Salmonella enterica subsp. enterica serovar Braenderup
GCA_009998005.1	AANBMQ000000000	SAMN03464513	CFSAN024578	Salmonella enterica subsp. enterica
GCA_010426325.1	AANSVA000000000	SAMN03464482	CFSAN024547	Salmonella enterica
GCA_010424665.1	AANSSU000000000	SAMN03464496	CFSAN024561	Salmonella enterica subsp. salamae
GCA_010392365.1	AANQMW000000000	SAMN03464467	CFSAN024532	Salmonella enterica subsp. enterica
GCA_010459205.1	AANURN000000000	SAMN03464517	CFSAN024582	Salmonella enterica subsp. enterica serovar Oslo
GCA_010458905.1	AANURC000000000	SAMN03464417	CFSAN024482	Salmonella enterica subsp. enterica serovar Newport
GCA_010452595.1	AANUYT000000000	SAMN03464507	CFSAN024572	Salmonella enterica subsp. enterica
GCA_010503675.1	AANXYS000000000	SAMN03464540	CFSAN024605	Salmonella enterica subsp. enterica serovar Abaetetuba
GCA_010502835.1	AANXXP000000000	SAMN03464430	CFSAN024495	Salmonella enterica
GCA_010510975.1	AANYLF000000000	SAMN03464536	CFSAN024601	Salmonella enterica subsp. enterica
GCA_010510715.1	AANYKL000000000	SAMN03464426	CFSAN024491	Salmonella enterica subsp. enterica serovar Anatum
GCA_010509895.1	AANYJC000000000	SAMN03464428	CFSAN024493	Salmonella enterica
GCA_010566585.1	AAOCDV000000000	SAMN03464440	CFSAN024505	Salmonella enterica subsp. enterica serovar Pomona
GCA_010538115.1	AAOAGN000000000	SAMN03464520	CFSAN024585	Salmonella enterica subsp. enterica
GCA_010537955.1	AAOAGB000000000	SAMN03464420	CFSAN024485	Salmonella enterica subsp. enterica serovar Newport
GCA_010796515.1	AAOPUC000000000	SAMN03464431	CFSAN024496	Salmonella enterica
GCA_010565565.1	AAOCCC000000000	SAMN03464511	CFSAN024576	Salmonella enterica subsp. salamae
GCA_010565045.1	AAOCAZ000000000	SAMN03464423	CFSAN024488	Salmonella enterica subsp. enterica
GCA_010564585.1	AAOCBQ000000000	SAMN03464498	CFSAN024563	Salmonella enterica
GCA_010645565.1	AAOGEL000000000	SAMN03464443	CFSAN024508	Salmonella enterica subsp. enterica serovar Newport
GCA_010645475.1	AAOGED000000000	SAMN03464486	CFSAN024551	Salmonella enterica subsp. salamae
GCA_010645425.1	AAOGEH000000000	SAMN03464549	CFSAN024614	Salmonella enterica subsp. salamae
GCA_010632085.1	AAOFIN000000000	SAMN02335378	CFSAN006240	Salmonella enterica subsp. enterica serovar Saintpaul
GCA_010794115.1	AAOPRP000000000	SAMN03464433	CFSAN024498	Salmonella enterica
GCA_010794055.1	AAOPOP000000000	SAMN03464531	CFSAN024596	Salmonella enterica subsp. enterica
GCA_010793215.1	AAOPQI000000000	SAMN03464541	CFSAN024606	Salmonella enterica subsp. enterica serovar Panama
GCA_010792275.1	AAOPRU000000000	SAMN03464501	CFSAN024566	Salmonella enterica subsp. enterica
GCA_010740055.1	AAOMCQ000000000	SAMN03464449	CFSAN024514	Salmonella enterica subsp. enterica serovar Newport
GCA_010715135.1	AAOLPW000000000	SAMN03464451	CFSAN024516	Salmonella enterica subsp. enterica serovar Newport
GCA_010713535.1	AAOLLE000000000	SAMN03464477	CFSAN024542	Salmonella enterica subsp. salamae
GCA_010713075.1	AAOLJX000000000	SAMN03464503	CFSAN024568	Salmonella enterica subsp. enterica
GCA_010712835.1	AAOLJL000000000	SAMN03464545	CFSAN024610	Salmonella enterica subsp. enterica serovar Javiana
GCA_010712335.1	AAOLJV000000000	SAMN03464493	CFSAN024558	Salmonella enterica subsp. diarizonae
GCA_010712015.1	AAOLIC000000000	SAMN02335413	CFSAN006277	Salmonella enterica subsp. enterica serovar Javiana
GCA_010711935.1	AAOLIF000000000	SAMN03464436	CFSAN024501	Salmonella enterica subsp. salamae
GCA_010688065.1	AAOHRH000000000	SAMN03464524	CFSAN024589	Salmonella enterica subsp. enterica
GCA_010688045.1	AAOHRO000000000	SAMN03464518	CFSAN024583	Salmonella enterica subsp. enterica
GCA_010688025.1	AAOHQW000000000	SAMN03464508	CFSAN024573	Salmonella enterica subsp. enterica
GCA_010687885.1	AAOHRR000000000	SAMN03464488	CFSAN024553	Salmonella enterica subsp. enterica serovar Pomona
GCA_010687865.1	AAOHQZ000000000	SAMN03464526	CFSAN024591	Salmonella enterica subsp. enterica
GCA_010687805.1	AAOHQX000000000	SAMN03464495	CFSAN024560	Salmonella enterica subsp. enterica
GCA_010648005.1	AAOGIT000000000	SAMN03464441	CFSAN024506	Salmonella enterica subsp. enterica
GCA_008669875.1	AAKZTA000000000	SAMN03464446	CFSAN024511	Salmonella enterica subsp. enterica serovar Newport
GCA_008669795.1	AAKZSX000000000	SAMN03464491	CFSAN024556	Salmonella enterica subsp. enterica serovar Newport
GCA_008669755.1	AAKZTB000000000	SAMN03464474	CFSAN024539	Salmonella enterica subsp. enterica serovar Newport
GCA_008669715.1	AAKZSW000000000	SAMN03464456	CFSAN024521	Salmonella enterica subsp. enterica serovar Muenchen
GCA_008669655.1	AAKZSZ000000000	SAMN03464459	CFSAN024524	Salmonella enterica subsp. enterica serovar Newport
GCA_008669355.1	AAKZSS000000000	SAMN03464448	CFSAN024513	Salmonella enterica subsp. enterica serovar Newport
GCA_008669275.1	AAKZSU000000000	SAMN03464478	CFSAN024543	Salmonella enterica subsp. enterica serovar Rubislaw
GCA_008677435.1	AAKZTE000000000	SAMN03464422	CFSAN024487	Salmonella enterica subsp. enterica serovar Muenchen
GCA_008116585.1	AAJQMY000000000	SAMN03464469	CFSAN024534	Salmonella enterica subsp. enterica serovar Muenchen
GCA_008116555.1	AAJQNH000000000	SAMN03464509	CFSAN024574	Salmonella enterica subsp. enterica serovar Newport
GCA_008116545.1	AAJQNE000000000	SAMN03464438	CFSAN024503	Salmonella enterica subsp. enterica serovar Newport
GCA_008116435.1	AAJQNO000000000	SAMN03464510	CFSAN024575	Salmonella enterica subsp. enterica serovar Newport
GCA_008116445.1	AAJQNI000000000	SAMN03464445	CFSAN024510	Salmonella enterica subsp. enterica serovar Newport
GCA_008116425.1	AAJQNL000000000	SAMN02335399	CFSAN006261	Salmonella enterica subsp. enterica serovar Agona
GCA_008115485.1	AAJQOA000000000	SAMN03464465	CFSAN024530	Salmonella enterica subsp. enterica serovar Newport
GCA_008115445.1	AAJQNK000000000	SAMN03464500	CFSAN024565	Salmonella enterica subsp. enterica serovar Give
GCA_008115405.1	AAJQNS000000000	SAMN03464447	CFSAN024512	Salmonella enterica subsp. enterica serovar Newport
GCA_008115365.1	AAJQNR000000000	SAMN03464502	CFSAN024567	Salmonella enterica subsp. enterica serovar Newport
GCA_008115305.1	AAJQNV000000000	SAMN03464471	CFSAN024536	Salmonella enterica subsp. enterica serovar Newport
GCA_008115285.1	AAJQNT000000000	SAMN03464442	CFSAN024507	Salmonella enterica subsp. enterica serovar Newport
GCA_008115265.1	AAJQNX000000000	SAMN03464481	CFSAN024546	Salmonella enterica subsp. enterica serovar Newport
GCA_008115225.1	AAJQNW000000000	SAMN03464444	CFSAN024509	Salmonella enterica subsp. enterica serovar Newport
GCA_008115205.1	AAJQNM000000000	SAMN03464425	CFSAN024490	Salmonella enterica subsp. enterica serovar Give
GCA_008115105.1	AAJQNP000000000	SAMN03464473	CFSAN024538	Salmonella enterica subsp. enterica serovar Newport
GCA_008115045.1	AAJQMZ000000000	SAMN03464472	CFSAN024537	Salmonella enterica subsp. enterica serovar Newport
GCA_008114985.1	AAJQMM000000000	SAMN03464530	CFSAN024595	Salmonella enterica subsp. enterica serovar Newport
GCA_008114965.1	AAJQMO000000000	SAMN03464533	CFSAN024598	Salmonella enterica subsp. enterica serovar Newport
GCA_008114945.1	AAJQMR000000000	SAMN03464527	CFSAN024592	Salmonella enterica subsp. enterica serovar Newport
GCA_008114925.1	AAJQML000000000	SAMN03464521	CFSAN024586	Salmonella enterica subsp. enterica serovar Newport
GCA_008114885.1	AAJQMH000000000	SAMN03464544	CFSAN024609	Salmonella enterica subsp. enterica serovar Newport
GCA_008114785.1	AAJQME000000000	SAMN03464538	CFSAN024603	Salmonella enterica subsp. enterica serovar Newport
GCA_008114325.1	AAJQNF000000000	SAMN03464439	CFSAN024504	Salmonella enterica subsp. enterica serovar Newport
GCA_008113965.1	AAJQNN000000000	SAMN03464480	CFSAN024545	Salmonella enterica subsp. enterica serovar Rubislaw
GCA_008113925.1	AAJQNZ000000000	SAMN03464427	CFSAN024492	Salmonella enterica subsp. enterica serovar Newport
GCA_008113725.1	AAJQMN000000000	SAMN03464537	CFSAN024602	Salmonella enterica subsp. enterica serovar Newport
GCA_008113705.1	AAJQMU000000000	SAMN03464535	CFSAN024600	Salmonella enterica subsp. enterica serovar Newport
GCA_008113665.1	AAJQMQ000000000	SAMN03464416	CFSAN024802	Salmonella enterica subsp. enterica serovar Newport
GCA_008113285.1	AAJQNJ000000000	SAMN02335398	CFSAN006260	Salmonella enterica subsp. enterica serovar Agona
GCA_011417355.1	AAPYWF000000000	SAMN03464479	CFSAN024544	Salmonella enterica subsp. enterica
GCA_011417155.1	AAPYWD000000000	SAMN03464523	CFSAN024588	Salmonella enterica subsp. enterica
GCA_011417115.1	AAPYVH000000000	SAMN03464424	CFSAN024489	Salmonella enterica subsp. enterica
GCA_011462415.1	AAQBTY000000000	SAMN02335395	CFSAN006257	Salmonella enterica subsp. enterica serovar Agona
GCA_011462385.1	AAQBTQ000000000	SAMN02335373	CFSAN006235	Salmonella enterica subsp. enterica serovar Newport
GCA_011462155.1	AAQBUE000000000	SAMN02335404	CFSAN006266	Salmonella enterica subsp. enterica serovar Agona
GCA_011462035.1	AAQBUJ000000000	SAMN02335397	CFSAN006259	Salmonella enterica subsp. enterica serovar Agona
GCA_011461735.1	AAQBSS000000000	SAMN02335400	CFSAN006262	Salmonella enterica subsp. enterica serovar Agona
GCA_011461695.1	AAQBST000000000	SAMN02335374	CFSAN006236	Salmonella enterica subsp. enterica serovar Newport
GCA_011461675.1	AAQBSQ000000000	SAMN02335393	CFSAN006255	Salmonella enterica subsp. enterica serovar Agona
GCA_011461595.1	AAQBUG000000000	SAMN02335375	CFSAN006237	Salmonella enterica subsp. enterica serovar Newport
GCA_011461095.1	AAQBRQ000000000	SAMN02335394	CFSAN006256	Salmonella enterica subsp. enterica serovar Agona
GCA_011461055.1	AAQBRU000000000	SAMN02335403	CFSAN006265	Salmonella enterica subsp. enterica serovar Agona
GCA_011460995.1	AAQBRP000000000	SAMN02335401	CFSAN006263	Salmonella enterica subsp. enterica serovar Agona
GCA_011460975.1	AAQBRO000000000	SAMN02335371	CFSAN006233	Salmonella enterica subsp. enterica serovar Muenchen
GCA_011461815.1	AAQBSR000000000	SAMN02335396	CFSAN006258	Salmonella enterica subsp. enterica serovar Agona
GCA_011446455.1	AAQAPW000000000	SAMN03464418	CFSAN024483	Salmonella enterica subsp. enterica serovar Newport
GCA_011438715.1	AAQABZ000000000	SAMN03464532	CFSAN024597	Salmonella enterica subsp. enterica
GCA_011110235.1	AAPHLR000000000	SAMN03464492	CFSAN024557	Salmonella enterica subsp. salamae
GCA_011099925.1	AAPGUJ000000000	SAMN03464434	CFSAN024499	Salmonella enterica subsp. enterica
GCA_011108135.1	AAPHJN000000000	SAMN03464432	CFSAN024497	Salmonella enterica subsp. enterica serovar Abaetetuba
GCA_011107695.1	AAPHJJ000000000	SAMN03464437	CFSAN024502	Salmonella enterica subsp. enterica serovar Panama

SRA Data Details

Parameter	Value
Data volume, Gbases	285
Data volume, Tbytes	0.13

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Salmonella enterica

GenomeTrakr Project: Technology and Food Safety Services, Mexico

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