Text categorization models for retrieval of high quality articles in internal medicine

. 2003:2003:31-5.

Text categorization models for retrieval of high quality articles in internal medicine

Y Aphinyanaphongs¹, C F Aliferis

Affiliations

PMID: 14728128
PMCID: PMC1480096

Text categorization models for retrieval of high quality articles in internal medicine

Y Aphinyanaphongs et al. AMIA Annu Symp Proc. 2003.

. 2003:2003:31-5.

Authors

Y Aphinyanaphongs¹, C F Aliferis

Affiliation

¹ Department of Biomedical Informatics, Vanderbilt University, Nashville, TN, USA.

PMID: 14728128
PMCID: PMC1480096

Abstract

The discipline of Evidence Based Medicine (EBM) studies formal and quasi-formal methods for identifying high quality medical information and abstracting it in useful forms so that patients receive the best customized care possible [1]. Current computer-based methods for finding high quality information in PubMed and similar bibliographic resources utilize search tools that employ preconstructed Boolean queries. These clinical queries are derived from a combined application of (a) user interviews, (b) ad-hoc manual document quality review, and (c) search over a constrained space of disjunctive Boolean queries. The present research explores the use of powerful text categorization (machine learning) methods to identify content-specific and high-quality PubMed articles. Our results show that models built with the proposed approach outperform the Boolean based PubMed clinical query filters in discriminatory power.

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Text categorization models for high-quality article retrieval in internal medicine.
Aphinyanaphongs Y, Tsamardinos I, Statnikov A, Hardin D, Aliferis CF. Aphinyanaphongs Y, et al. J Am Med Inform Assoc. 2005 Mar-Apr;12(2):207-16. doi: 10.1197/jamia.M1641. Epub 2004 Nov 23. J Am Med Inform Assoc. 2005. PMID: 15561789 Free PMC article.
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Petersen H, Poon J, Poon SK, Loy C. Petersen H, et al. JMIR Med Inform. 2014 May 27;2(1):e11. doi: 10.2196/medinform.3037. JMIR Med Inform. 2014. PMID: 25600450 Free PMC article.
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References

1. Sackett, D.L., et al., Evidence Based Medicine: How To Practice and Teach EBM 1998, Edinburgh: Churchill Livingstone.
1. Bigby M. Evidence-based medicine in a nutshell. A guide to finding and using the best evidence in caring for patients. Arch Dermatol. 1998;123(12):1609–18. - PubMed
1. Haynes B, et al. Developing Optimal Search Strategies for Detecting Sound Clinical Studies in MEDLINE. JAMIA. 1994;1(6):447–458. - PMC - PubMed
1. http://www.ncbi.nlm.nih.gov/PubMed/
1. Purpose and Procedure. ACP Journal. 1999;131(1):A-15–A-16.

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[1] Sackett, D.L., et al., Evidence Based Medicine: How To Practice and Teach EBM 1998, Edinburgh: Churchill Livingstone.

[2] Sackett, D.L., et al., Evidence Based Medicine: How To Practice and Teach EBM 1998, Edinburgh: Churchill Livingstone.

[3] Bigby M. Evidence-based medicine in a nutshell. A guide to finding and using the best evidence in caring for patients. Arch Dermatol. 1998;123(12):1609–18. - PubMed

[4] Bigby M. Evidence-based medicine in a nutshell. A guide to finding and using the best evidence in caring for patients. Arch Dermatol. 1998;123(12):1609–18. - PubMed

[5] Haynes B, et al. Developing Optimal Search Strategies for Detecting Sound Clinical Studies in MEDLINE. JAMIA. 1994;1(6):447–458. - PMC - PubMed

[6] Haynes B, et al. Developing Optimal Search Strategies for Detecting Sound Clinical Studies in MEDLINE. JAMIA. 1994;1(6):447–458. - PMC - PubMed

[7] http://www.ncbi.nlm.nih.gov/PubMed/

[8] http://www.ncbi.nlm.nih.gov/PubMed/

[9] Purpose and Procedure. ACP Journal. 1999;131(1):A-15–A-16.

[10] Purpose and Procedure. ACP Journal. 1999;131(1):A-15–A-16.

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Text categorization models for retrieval of high quality articles in internal medicine

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Text categorization models for retrieval of high quality articles in internal medicine

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