Commit graph

18 commits

Author SHA1 Message Date
lucasmbrown-usds
07c4c030d3 fixing merge conflicts 2022-09-30 13:43:31 -04:00
Matt Bowen
d5fbb802e8
Add FUDS ETL (#1817)
* Add spatial join method (#1871)

Since we'll need to figure out the tracts for a large number of points
in future tickets, add a utility to handle grabbing the tract geometries
and adding tract data to a point dataset.

* Add FUDS, also jupyter lab (#1871)

* Add YAML configs for FUDS (#1871)

* Allow input geoid to be optional (#1871)

* Add FUDS ETL, tests, test-datae noteobook (#1871)

This adds the ETL class for Formerly Used Defense Sites (FUDS). This is
different from most other ETLs since these FUDS are not provided by
tract, but instead by geographic point, so we need to assign FUDS to
tracts and then do calculations from there.

* Floats -> Ints, as I intended (#1871)

* Floats -> Ints, as I intended (#1871)

* Formatting fixes (#1871)

* Add test false positive GEOIDs (#1871)

* Add gdal binaries (#1871)

* Refactor pandas code to be more idiomatic (#1871)

Per Emma, the more pandas-y way of doing my counts is using np.where to
add the values i need, then groupby and size. It is definitely more
compact, and also I think more correct!

* Update configs per Emma suggestions (#1871)

* Type fixed! (#1871)

* Remove spurious import from vscode (#1871)

* Snapshot update after changing col name (#1871)

* Move up GDAL (#1871)

* Adjust geojson strategy (#1871)

* Try running census separately first (#1871)

* Fix import order (#1871)

* Cleanup cache strategy (#1871)

* Download census data from S3 instead of re-calculating (#1871)

* Clarify pandas code per Emma (#1871)
2022-08-16 13:28:39 -04:00
Jorge Escobar
8149ac31c5
Starting Tribal Boundaries Work (#1736)
* starting tribal pr

* further pipeline work

* bia merge working

* alaska villages and tribal geo generate

* tribal folders

* adding data full run

* tile generation

* tribal tile deploy
2022-07-30 01:13:10 -04:00
Jorge Escobar
7b05ee9c76
S3 Parallel Upload and Deletions (#1410)
* installation step

* trigger action

* installing to home dir

* dry-run

* pyenv

* py 2.8

* trying s4cmd

* removing pyenv

* poetry s4cmd

* num-threads

* public read

* poetry cache

* s4cmd all around

* poetry cache

* poetry cache

* install poetry packages

* poetry echo

* let's do this

* s4cmd install on run

* s4cmd

* ad aws back

* add aws back

* testing census api key and poetry caching

* census api key

* census api

* census api key #3

* 250

* poetry update

* poetry change

* check census api key

* force flag

* update score gen and tilefy; remove cached fips

* small gdal update

* invalidation

* missing cache ids
2022-03-17 23:19:23 -04:00
Jorge Escobar
9709d08ca3
Update Side Panel Tile Data (#866)
* Update Side Panel Tile Data

* Update Side Panel Tile Data

* Correct indicator names to match csv

* Replace Score with Rate

* Comment out FEMA Loss Rate to troubleshoot

* Removes all "FEMA Loss Rate" array elements

* Revert FEMA to Score

* Remove expected loss rate

* Remove RMP and NPL from BASIC array

* Attempt to make shape mismatch align

- update README typo

* Add Score L indicators to TILE_SCORE_FLOAT_COLUMNS

* removing cbg references

* completes the ticket

* Update side panel fields

* Update index file writing to create parent dir

* Updates from linting

* fixing missing field_names for island territories 90th percentile fields

* Update downloadable fields and fix field name

* Update file fields and tests

* Update ordering of fields and leave TODO

* Update pickle after re-ordering of file

* fixing bugs in etl_score_geo

* Repeating index for diesel fix

* passing tests

* adding pytest.ini

Co-authored-by: Vim USDS <vimal.k.shah@omb.eop.gov>
Co-authored-by: Shelby Switzer <shelby.switzer@cms.hhs.gov>
Co-authored-by: lucasmbrown-usds <lucas.m.brown@omb.eop.gov>
2021-12-13 14:53:50 -05:00
Jorge Escobar
f915e20e91 Esfoobar usds/835 census tracts geojson (#916)
* Census Tracts instead of CBGs

* typo
2021-11-30 13:49:20 -05:00
Jorge Escobar
0a21fc6b12
Add territory boundary data (#885)
* Add territory boundary data

* housing and transp

* lint

* lint

* lint
2021-11-16 10:05:09 -05:00
Jorge Escobar
053dde0d40
Display score L on map (#849)
* updates to first docker run

* tile constants

* frontend changes

* updating pickles instructions

* pickles
2021-11-05 16:26:14 -04:00
Jorge Escobar
1b17af84c8
Combine + Tilefy (#806)
* init

* score-post

* added score csv s3 download; remore poetry cmds from readme

* working census tile fetch

* PR review

* Github Actions Work
2021-11-01 18:05:05 -04:00
Jorge Escobar
3b04356fb3
Data sources from S3 (#769)
* Started 535

* Data sources from S3

* lint

* renove breakpoints

* PR comments

* lint

* census data completed

* lint

* renaming data source
2021-10-13 16:00:33 -04:00
Jorge Escobar
fc5ed37fca
dependabot bump pillow (#681)
* dependabot bump pillow

* updated poetry

* adding encoding to file open
2021-09-14 17:28:59 -04:00
Lucas Merrill Brown
65ceb7900f
Score F, testing methodology (#510)
* fixing dependency issue

* fixing more dependencies

* including fraction of state AMI

* wip

* nitpick whitespace

* etl working now

* wip on scoring

* fix rename error

* reducing metrics

* fixing score f

* fixing readme

* adding dependency

* passing tests;

* linting/black

* removing unnecessary sample

* fixing error

* adding verify flag on etl/base

Co-authored-by: Jorge Escobar <jorge.e.escobar@omb.eop.gov>
2021-08-24 16:40:54 -04:00
Nat Hillard
ec19d86f6f
Adding back census to list of potential datasets, but separating out from standard list (#484)
Error this addresses:
  File "/Users/lucas/Documents/usds/repos/justice40-tool/data/data-pipeline/data_pipeline/etl/runner.py", line 71, in etl_runner
    f"data_pipeline.etl.sources.{dataset['module_dir']}.etl"
TypeError: 'NoneType' object is not subscriptable
2021-08-09 09:52:06 -04:00
Jorge Escobar
f51b0d69d9
Poetry updates for application (#483) 2021-08-06 16:24:30 -04:00
Nat Hillard
9d962eb5d9
Moving from relative imports to absolute to enable poetry run python data-pipeline/application.py [command] (#476) 2021-08-06 11:41:28 -04:00
Nat Hillard
45a8b1c026
Census ETL should use standard ETL form (#474)
* Fixes #473
Census ETL should use standard ETL form

* linter fixes
2021-08-06 11:01:51 -04:00
Nat Hillard
9f3b2f056b
Fixes #467: (#470)
If the census download task is run more than once,
us.csv doubles in size and all data is removed from dataframe
2021-08-05 16:20:18 -04:00
Nat Hillard
c1568e87c0
Data directory should adopt standard Poetry-suggested python package structure (#457)
* Fixes #456 - Our data directory should adopt standard python package structure
* a few missed references
* updating readme
* updating requirements
* Running Black
* Fixes for flake8
* updating pylint
2021-08-05 15:35:54 -04:00