Commit graph

31 commits

Author SHA1 Message Date
Jorge Escobar
eb1cb8884e
Adding a note about Scipy installation on newer MacOS 2022-05-03 17:26:05 -04:00
Jorge Escobar
7f91e2b06b
ArcGIS zipping (#1391)
* ArcGIS zipping

* lint

* shapefile zip

* removing space in GMT

* adding shapefile to be staging gha
2022-03-09 18:00:20 -05:00
Jorge Escobar
1730572aa6
Reducing Docker start up and adding ArcGIS URL (#1386)
* Reducing Docker start up and adding ArcGIS URL

* Updating ArcGIS URLs
2022-03-09 08:55:17 -05:00
Vim
f90125d1b4
Update side panel to 3-state design (#1276)
* Update field name to follow constant standard

* Add table to ETL commands to README

* Update Generate Map Tiles run time

* Add a comma to copy

* Add 3 state UI experience

- PR will only show workforce dev
- IA will only show workforce dev w/o linguistic iso
- update tests to tests 3 states
- change state to territory for Island Areas

* Modify PR and IA threshold counts

* Update tile_data_expected.pkl file
2022-02-16 14:24:35 -08:00
Lucas Merrill Brown
3e37d9d1a3
Issue 1075: update snapshots using command-line flag (#1249)
* Adding skippable tests using command-line flag
2022-02-14 12:16:52 -05:00
Shaun Verch
0abf04d6c2
Remove requirements.txt as a dependency (#1111)
* Remove requirements.txt as a dependency

This converts both docker and tox to use poetry, eliminating usage of
requirements.txt in both flows.

- In tox, uses the tox-poetry package which installs dependencies from
  the lockfile.
- In docker, uses
  https://stackoverflow.com/questions/53835198/integrating-python-poetry-with-docker
  as a reference.

* Don't copy pyproject.toml

* Remove obsoleted docs about requirements.txt

* Add --full-trace option to pytest

* Fix liccheck

liccheck works with requirements.txt, not with poetry, so there needs to
be an extra translation step.

* TEMP: Add WIP fix for pandas issue

This is just to see if the github actions would pass once this fix gets
merged, but it's being reviewed separately.

* Revert "TEMP: Add WIP fix for pandas issue"

This reverts commit 06e38e8cc77f5f3105c6e7a9449901db67aa1c82.
2022-01-10 16:43:56 -05:00
Shaun Verch
d90e028c1b
Update documentation to make it easier for users to find the right content for them (#1016)
* First pass of updating documentation for new users

Trying to look at this from the perspective of someone new to the
project, and create some pathways to make it easier for people to get to
the content they are looking for.

* Make it clear that docker is doing the setup

* Link installation again from the main README

* Add some docs about the github actions

* Add markdown link check

* Move git installation first

* Add config for markdown link checker

* Fix some links

* Correct handling of repo root relative links

* Fix broken links in data roadmap

* Fix more broken links

* Fix more links

* Ignore link that's returning a 403 to the checker

It actually works if you go in a browser.

* Fix another broken link

* Ignore more urls that don't work

* Update the readme under docs

* Add some more dataset links

* More strongly call out the quickstart

* Try to call out even more the quickstart link

* Fix dead links

* Add note about initialization time

* Remove broken link from spanish install guide

These will be updated later with a full translation
2021-12-16 10:16:28 -05:00
Jorge Escobar
9709d08ca3
Update Side Panel Tile Data (#866)
* Update Side Panel Tile Data

* Update Side Panel Tile Data

* Correct indicator names to match csv

* Replace Score with Rate

* Comment out FEMA Loss Rate to troubleshoot

* Removes all "FEMA Loss Rate" array elements

* Revert FEMA to Score

* Remove expected loss rate

* Remove RMP and NPL from BASIC array

* Attempt to make shape mismatch align

- update README typo

* Add Score L indicators to TILE_SCORE_FLOAT_COLUMNS

* removing cbg references

* completes the ticket

* Update side panel fields

* Update index file writing to create parent dir

* Updates from linting

* fixing missing field_names for island territories 90th percentile fields

* Update downloadable fields and fix field name

* Update file fields and tests

* Update ordering of fields and leave TODO

* Update pickle after re-ordering of file

* fixing bugs in etl_score_geo

* Repeating index for diesel fix

* passing tests

* adding pytest.ini

Co-authored-by: Vim USDS <vimal.k.shah@omb.eop.gov>
Co-authored-by: Shelby Switzer <shelby.switzer@cms.hhs.gov>
Co-authored-by: lucasmbrown-usds <lucas.m.brown@omb.eop.gov>
2021-12-13 14:53:50 -05:00
Lucas Merrill Brown
7fcecaee42
Issue 970: reverse percentiles for AMI and life expectancy (#1018)
* switching to low

* fixing score-etl-post

* updating comments

* fixing comparison

* create separate field for clarity

* comment fix

* removing healthy food

* fixing bug in score post

* running black and adding comment

* Update pickles and add a helpful notes to README

Co-authored-by: Shelby Switzer <shelby.switzer@cms.hhs.gov>
2021-12-10 10:16:22 -05:00
Jorge Escobar
cc7bf0d73d County mapping to Tracts (#923)
* County mapping to Tracts

* passing tests

* last traces of cbg
2021-11-30 13:49:21 -05:00
Jorge Escobar
053dde0d40
Display score L on map (#849)
* updates to first docker run

* tile constants

* frontend changes

* updating pickles instructions

* pickles
2021-11-05 16:26:14 -04:00
Jorge Escobar
1b17af84c8
Combine + Tilefy (#806)
* init

* score-post

* added score csv s3 download; remore poetry cmds from readme

* working census tile fetch

* PR review

* Github Actions Work
2021-11-01 18:05:05 -04:00
Shelby Switzer
d3a18352fc
Add pytest to tox run in CI/CD (#713)
* Add pytest to tox run in CI/CD

* Try fixing tox dependencies for pytest

* update poetry to get ci/cd passing

* Run poetry export with --dev flag to include dev dependencies such as pytest

* WIP updating test fixtures to include PDF

* Remove dev dependencies from reqs and add pytest to envlist to make build faster

* passing score_post tests

* Add pytest tox (#729)

* Fix failing pytest

* Fixes failing tox tests and updates requirements.txt to include dev deps

* pickle protocol 4

Co-authored-by: Shelby Switzer <shelby.switzer@cms.hhs.gov>
Co-authored-by: Jorge Escobar <jorge.e.escobar@omb.eop.gov>
Co-authored-by: Billy Daly <williamdaly422@gmail.com>
Co-authored-by: Jorge Escobar <83969469+esfoobar-usds@users.noreply.github.com>
2021-09-22 13:47:37 -04:00
Jorge Escobar
5bd63c083b
Run all Census, ETL, Score, Combine and Tilefy in one command (#662)
* Run all Census, ETL, Score, Combine and Tilefy in one command

* docker cmd

* some docker improvements

* feedback updates

* lint
2021-09-14 14:15:34 -04:00
Jorge Escobar
879cb7d022
hotfix wrong score tile csv path (#671)
* hotfix wrong score tile csv path

* updating test

* forcing update

* triggering action
2021-09-14 07:27:48 -04:00
Nat Hillard
536a35d6a0
Data Unit Tests (#509)
* Fixes #341 -
As a J40 developer, I want to write Unit Tests for the ETL files,
so that tests are run on each commit

* Location bug

* Adding Load tests

* Fixing XLSX filename

* Adding downloadable zip test

* updating pickle

* Fixing pylint warnings

* Updte readme to correct some typos and reorganize test content structure

* Removing unused schemas file, adding details to readme around pickles, per PR feedback

* Update test to pass with Score D added to score file; update path in readme

* fix requirements.txt after merge

* fix poetry.lock after merge

Co-authored-by: Shelby Switzer <shelby.switzer@cms.hhs.gov>
2021-09-10 14:17:34 -04:00
Shelby Switzer
ac62933d16
Initial refactor for Score ETL (#618)
* WIP refactor

* Exract score calculations into their own methods

* do all initial df prep in single method

* Fix error in docs for running etl for single dataset

* WIP understanding HUD and linguistic iso data

* Add comments from initial group review on PR

Co-authored-by: Shelby Switzer <shelby.switzer@cms.hhs.gov>
2021-09-10 10:34:34 -04:00
Jorge Escobar
470c474367
Updated README (#652)
* Updated README

- Added a link to the full score data set on S3
- Some Docker updates

* typo
2021-09-10 10:15:46 -04:00
Jorge Escobar
f5ba63977a
Hotfix for Readme and ACS File name (#563) 2021-08-24 17:01:12 -04:00
Lucas Merrill Brown
65ceb7900f
Score F, testing methodology (#510)
* fixing dependency issue

* fixing more dependencies

* including fraction of state AMI

* wip

* nitpick whitespace

* etl working now

* wip on scoring

* fix rename error

* reducing metrics

* fixing score f

* fixing readme

* adding dependency

* passing tests;

* linting/black

* removing unnecessary sample

* fixing error

* adding verify flag on etl/base

Co-authored-by: Jorge Escobar <jorge.e.escobar@omb.eop.gov>
2021-08-24 16:40:54 -04:00
Shelby Switzer
2c79396550
Initial draft for data provenance addition to README (#528)
* Initial draft for data provenance

We want to make the data usable/available at every step of our data
pipeline. This starts te addition to the README that spells out the data
provenance and where each version of the data as it goes through our
pipeline lives.

* Update README with placeholders for next steps in data provenance

* Add coming soon placeholders for remaining data locations

Co-authored-by: Shelby Switzer <shelby.switzer@cms.hhs.gov>
2021-08-16 16:45:54 -04:00
Jorge Escobar
773c035493
AWS Sync Public Read (#508)
* adding layer to mvts

* small fix for GHA

* AWS Sync Public Read

* removed temp file

* updated state media income ftp
2021-08-12 14:17:25 -04:00
Jorge Escobar
3d8dbb293c
Tile-baking columns with floating rounds completed (#491)
* Tile-baking columns with floating rounds completed

* completed

* correction on github workflow

* tiles folder no longer needed

* addressed comments

* updating requirements.txt

* poetry lock update

* adding xlswriter

* final poetrylock

* updated requirements.txt

* checkpoint

* removed matplotlib

* ignoring pylint too many statements

* reinstated too many statements

* converting data sync to generate score GHA UI-driven
2021-08-10 15:28:50 -04:00
Nat Hillard
6c986adfe4
Check in VSCode config for easier local debug (#487)
* Fixes #466 - Task: Check in VSCode config for easier local debug
2021-08-09 14:55:13 -04:00
Jorge Escobar
f51b0d69d9
Poetry updates for application (#483) 2021-08-06 16:24:30 -04:00
Nat Hillard
c1568e87c0
Data directory should adopt standard Poetry-suggested python package structure (#457)
* Fixes #456 - Our data directory should adopt standard python package structure
* a few missed references
* updating readme
* updating requirements
* Running Black
* Fixes for flake8
* updating pylint
2021-08-05 15:35:54 -04:00
Jorge Escobar
4d7465c833
Hotfix for fips zip download location + added full-score-run command (#465)
* Hotfix for S3 locations of data sources

* updated README

* lint failures

Co-authored-by: Nat Hillard <Nathaniel.K.Hillard@omb.eop.gov>
2021-08-05 12:55:21 -04:00
Jorge Escobar
5cb00ef0ce
Tile Generation Script (#433) 2021-08-03 18:23:57 -04:00
Shelby Switzer
387ee3a382
Update data documentation and some data steps (#407)
* Minor documentation updates, plus calenvironscreen  S3 URL fix

* Update score comparison docs and code

* Add steps for running the comparison tool
* Update HUD recap ETL to ensure GEOID is imported as a string (if it is
imported as an interger by default it  will strip the beginning "0" from
many IDs)

* Add note about execution time

* Move step from paragraph to list

* Update output dir in README for comp tool

Co-authored-by: Shelby Switzer <shelby.switzer@cms.hhs.gov>
2021-07-29 10:28:52 -04:00
Jorge Escobar
b404fdcc43
Generate Geo-aware scores for all zoom levels (#391)
* generate Geo-aware scores for all zoom levels

* usa high progress

* testing dissolve

* checkpoint

* changing type

* removing breakpoint

* validation notebooks

* quick update

* score validation

* fixes for county merge

* code completed
2021-07-28 16:07:28 -04:00
Jorge Escobar
543d147e61
Data folder restructuring in preparation for 361 (#376)
* initial checkin

* gitignore and docker-compose update

* readme update and error on hud

* encoding issue

* one more small README change

* data roadmap re-strcuture

* pyproject sort

* small update to score output folders

* checkpoint

* couple of last fixes
2021-07-20 14:55:39 -04:00
Renamed from score/README.md (Browse further)