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Data directory should adopt standard Poetry-suggested python package structure (#457)
* Fixes #456 - Our data directory should adopt standard python package structure * a few missed references * updating readme * updating requirements * Running Black * Fixes for flake8 * updating pylint
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61 changed files with 1273 additions and 1256 deletions
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data/data-pipeline/data_pipeline/etl/sources/census/etl.py
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data/data-pipeline/data_pipeline/etl/sources/census/etl.py
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import csv
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import json
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import os
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from pathlib import Path
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import geopandas as gpd
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from data_pipeline.utils import get_module_logger, unzip_file_from_url
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from .etl_utils import get_state_fips_codes
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logger = get_module_logger(__name__)
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def download_census_csvs(data_path: Path) -> None:
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"""Download all census shape files from the Census FTP and extract the geojson
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to generate national and by state Census Block Group CSVs and GeoJSONs
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Args:
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data_path (pathlib.Path): Name of the directory where the files and directories will
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be created
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Returns:
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None
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"""
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# the fips_states_2010.csv is generated from data here
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# https://www.census.gov/geographies/reference-files/time-series/geo/tallies.html
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state_fips_codes = get_state_fips_codes(data_path)
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geojson_dir_path = data_path / "census" / "geojson"
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for fips in state_fips_codes:
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# check if file exists
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shp_file_path = data_path / "census" / "shp" / fips / f"tl_2010_{fips}_bg10.shp"
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logger.info(f"Checking if {fips} file exists")
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if not os.path.isfile(shp_file_path):
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logger.info(f"Downloading and extracting {fips} shape file")
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# 2020 tiger data is here: https://www2.census.gov/geo/tiger/TIGER2020/BG/
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# But using 2010 for now
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cbg_state_url = f"https://www2.census.gov/geo/tiger/TIGER2010/BG/2010/tl_2010_{fips}_bg10.zip"
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unzip_file_from_url(
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cbg_state_url,
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data_path / "tmp",
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data_path / "census" / "shp" / fips,
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)
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cmd = (
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"ogr2ogr -f GeoJSON data/census/geojson/"
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+ fips
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+ ".json data/census/shp/"
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+ fips
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+ "/tl_2010_"
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+ fips
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+ "_bg10.shp"
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)
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os.system(cmd)
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# generate CBG CSV table for pandas
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## load in memory
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cbg_national = [] # in-memory global list
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cbg_per_state: dict = {} # in-memory dict per state
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for file in os.listdir(geojson_dir_path):
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if file.endswith(".json"):
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logger.info(f"Ingesting geoid10 for file {file}")
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with open(geojson_dir_path / file) as f:
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geojson = json.load(f)
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for feature in geojson["features"]:
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geoid10 = feature["properties"]["GEOID10"]
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cbg_national.append(str(geoid10))
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geoid10_state_id = geoid10[:2]
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if not cbg_per_state.get(geoid10_state_id):
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cbg_per_state[geoid10_state_id] = []
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cbg_per_state[geoid10_state_id].append(geoid10)
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csv_dir_path = data_path / "census" / "csv"
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## write to individual state csv
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for state_id in cbg_per_state:
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geoid10_list = cbg_per_state[state_id]
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with open(
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csv_dir_path / f"{state_id}.csv", mode="w", newline=""
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) as cbg_csv_file:
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cbg_csv_file_writer = csv.writer(
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cbg_csv_file,
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delimiter=",",
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quotechar='"',
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quoting=csv.QUOTE_MINIMAL,
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)
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for geoid10 in geoid10_list:
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cbg_csv_file_writer.writerow(
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[
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geoid10,
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]
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)
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## write US csv
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with open(csv_dir_path / "us.csv", mode="w", newline="") as cbg_csv_file:
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cbg_csv_file_writer = csv.writer(
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cbg_csv_file,
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delimiter=",",
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quotechar='"',
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quoting=csv.QUOTE_MINIMAL,
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)
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for geoid10 in cbg_national:
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cbg_csv_file_writer.writerow(
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[
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geoid10,
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]
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)
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## create national geojson
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logger.info("Generating national geojson file")
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usa_df = gpd.GeoDataFrame()
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for file_name in geojson_dir_path.rglob("*.json"):
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logger.info(f"Ingesting {file_name}")
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state_gdf = gpd.read_file(file_name)
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usa_df = usa_df.append(state_gdf)
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usa_df = usa_df.to_crs("+proj=longlat +ellps=WGS84 +datum=WGS84 +no_defs")
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logger.info("Writing national geojson file")
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usa_df.to_file(geojson_dir_path / "us.json", driver="GeoJSON")
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logger.info("Census block groups downloading complete")
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