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Add tests for all non-census sources (#1899)

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* Refactor CDC life-expectancy (1554)

* Update to new tract list (#1554)

* Adjust for tests (#1848)

* Add tests for cdc_places (#1848)

* Add EJScreen tests (#1848)

* Add tests for HUD housing (#1848)

* Add tests for GeoCorr (#1848)

* Add persistent poverty tests (#1848)

* Update for sources without zips, for new validation (#1848)

* Update tests for new multi-CSV but (#1848)

Lucas updated the CDC life expectancy data to handle a bug where two
states are missing from the US Overall download. Since virtually none of
our other ETL classes download multiple CSVs directly like this, it
required a pretty invasive new mocking strategy.

* Add basic tests for nature deprived (#1848)

* Add wildfire tests (#1848)

* Add flood risk tests (#1848)

* Add DOT travel tests (#1848)

* Add historic redlining tests (#1848)

* Add tests for ME and WI (#1848)

* Update now that validation exists (#1848)

* Adjust for validation (#1848)

* Add health insurance back to cdc places (#1848)

Ooops

* Update tests with new field (#1848)

* Test for blank tract removal (#1848)

* Add tracts for clipping behavior

* Test clipping and zfill behavior (#1848)

* Fix bad test assumption (#1848)

* Simplify class, add test for tract padding (#1848)

* Fix percentage inversion, update tests (#1848)

Looking through the transformations, I noticed that we were subtracting
a percentage that is usually between 0-100 from 1 instead of 100, and so
were endind up with some surprising results. Confirmed with lucasmbrown-usds

* Add note about first street data (#1848)
This commit is contained in:
Matt Bowen 2022-09-19 15:17:00 -04:00 • committed by GitHub
commit 876655d2b2
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88 changed files with 2032 additions and 178 deletions
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10
data/data-pipeline/data_pipeline/etl/sources/cdc_life_expectancy/etl.py
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@ -16,7 +16,12 @@ class CDCLifeExpectancy(ExtractTransformLoad):
GEO_LEVEL = ValidGeoLevel.CENSUS_TRACT
PUERTO_RICO_EXPECTED_IN_DATA = False
NAME = "cdc_life_expectancy"
USA_FILE_URL: str = "https://ftp.cdc.gov/pub/Health_Statistics/NCHS/Datasets/NVSS/USALEEP/CSV/US_A.CSV"
LOAD_YAML_CONFIG: bool = False
LIFE_EXPECTANCY_FIELD_NAME = "Life expectancy (years)"
INPUT_GEOID_TRACT_FIELD_NAME = "Tract ID"
STATES_MISSING_FROM_USA_FILE = ["23", "55"]
@ -69,8 +74,7 @@ class CDCLifeExpectancy(ExtractTransformLoad):
all_usa_raw_df = self._download_and_prep_data(
file_url=self.USA_FILE_URL,
download_file_name=self.get_tmp_path()
/ "cdc_life_expectancy"
/ "usa.csv",
/ "US_A.CSV",
)
# Check which states are missing
@ -91,7 +95,6 @@ class CDCLifeExpectancy(ExtractTransformLoad):
maine_raw_df = self._download_and_prep_data(
file_url=self.MAINE_FILE_URL,
download_file_name=self.get_tmp_path()
/ "cdc_life_expectancy"
/ "maine.csv",
)
@ -99,7 +102,6 @@ class CDCLifeExpectancy(ExtractTransformLoad):
wisconsin_raw_df = self._download_and_prep_data(
file_url=self.WISCONSIN_FILE_URL,
download_file_name=self.get_tmp_path()
/ "cdc_life_expectancy"
/ "wisconsin.csv",
)