Marshmallow Schemas for YAML files

This commit is contained in:
Jorge Escobar 2022-03-28 11:09:37 -04:00
parent 712e5bb4ed
commit 63ad12dbbb
6 changed files with 259 additions and 124 deletions

View file

@ -0,0 +1,34 @@
from dataclasses import dataclass, field
from enum import Enum
from typing import List
class FieldType(Enum):
STRING = "string"
INT64 = "int64"
BOOL = "bool"
FLOAT = "float"
PERCENTAGE = "percentage"
LOSS_RATE_PERCENTAGE = "loss_rate_percentage"
@dataclass
class CSVConfig:
@dataclass
class GlobalConfig:
@dataclass
class RoundingNum:
float: int
loss_rate_percentage: int
sort_by_label: str
rounding_num: RoundingNum
@dataclass
class Field:
score_name: str
label: str
format: FieldType = field(metadata={"by_value": True})
global_config: GlobalConfig
fields: List[Field]

View file

@ -1,17 +1,20 @@
from typing import List
from typing import List, Type
import datetime
import json
import logging
import os
import sys
import shutil
import uuid
import zipfile
from pathlib import Path
import urllib3
import requests
import yaml
from marshmallow_dataclass import class_schema
from data_pipeline.config import settings
from data_pipeline.content.schemas.csv import CSVConfig
## zlib is not available on all systems
@ -175,9 +178,12 @@ def unzip_file_from_url(
None
"""
# file_id allows us to evade race conditions on parallel ETLs
file_id = uuid.uuid4()
zip_file_path = download_file_from_url(
file_url=file_url,
download_file_name=download_path / "downloaded.zip",
download_file_name=download_path / f"downloaded-{file_id}.zip",
verify=verify,
)
@ -323,7 +329,9 @@ def zip_directory(
)
def load_yaml_dict_from_file(yaml_file_path: Path) -> dict:
def load_yaml_dict_from_file(
yaml_file_path: Path, yaml_schema: Type[CSVConfig]
) -> dict:
"""Load a YAML file specified in path into a Python dictionary.
Args:
@ -334,6 +342,8 @@ def load_yaml_dict_from_file(yaml_file_path: Path) -> dict:
"""
with open(yaml_file_path, encoding="UTF-8") as file:
yaml_dict = yaml.load(file, Loader=yaml.FullLoader)
pass
return yaml_dict

View file

@ -39,7 +39,7 @@ tests = ["pytest"]
[[package]]
name = "astroid"
version = "2.9.3"
version = "2.11.1"
description = "An abstract syntax tree for Python with inference support."
category = "main"
optional = false
@ -48,7 +48,7 @@ python-versions = ">=3.6.2"
[package.dependencies]
lazy-object-proxy = ">=1.4.0"
typing-extensions = {version = ">=3.10", markers = "python_version < \"3.10\""}
wrapt = ">=1.11,<1.14"
wrapt = ">=1.11,<2"
[[package]]
name = "atomicwrites"
@ -245,11 +245,11 @@ python-versions = ">=3.6"
[[package]]
name = "debugpy"
version = "1.5.1"
version = "1.6.0"
description = "An implementation of the Debug Adapter Protocol for Python"
category = "main"
optional = false
python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*"
python-versions = ">=3.7"
[[package]]
name = "decorator"
@ -267,6 +267,17 @@ category = "main"
optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
[[package]]
name = "dill"
version = "0.3.4"
description = "serialize all of python"
category = "main"
optional = false
python-versions = ">=2.7, !=3.0.*"
[package.extras]
graph = ["objgraph (>=1.7.2)"]
[[package]]
name = "distlib"
version = "0.3.4"
@ -374,7 +385,7 @@ pyflakes = ">=2.3.0,<2.4.0"
[[package]]
name = "fonttools"
version = "4.30.0"
version = "4.31.2"
description = "Tools to manipulate font files"
category = "main"
optional = false
@ -515,7 +526,7 @@ python-versions = "*"
[[package]]
name = "ipywidgets"
version = "7.6.5"
version = "7.7.0"
description = "IPython HTML widgets for Jupyter"
category = "main"
optional = false
@ -528,7 +539,7 @@ ipython-genutils = ">=0.2.0,<0.3.0"
jupyterlab-widgets = {version = ">=1.0.0", markers = "python_version >= \"3.6\""}
nbformat = ">=4.2.0"
traitlets = ">=4.3.1"
widgetsnbextension = ">=3.5.0,<3.6.0"
widgetsnbextension = ">=3.6.0,<3.7.0"
[package.extras]
test = ["pytest (>=3.6.0)", "pytest-cov", "mock"]
@ -572,11 +583,11 @@ python-versions = "*"
[[package]]
name = "jinja2"
version = "3.0.3"
version = "3.1.0"
description = "A very fast and expressive template engine."
category = "main"
optional = false
python-versions = ">=3.6"
python-versions = ">=3.7"
[package.dependencies]
MarkupSafe = ">=2.0"
@ -765,7 +776,7 @@ pygments = ">=2.4.1,<3"
[[package]]
name = "jupyterlab-widgets"
version = "1.0.2"
version = "1.1.0"
description = "A JupyterLab extension."
category = "main"
optional = false
@ -822,6 +833,43 @@ category = "main"
optional = false
python-versions = ">=3.7"
[[package]]
name = "marshmallow"
version = "3.15.0"
description = "A lightweight library for converting complex datatypes to and from native Python datatypes."
category = "main"
optional = false
python-versions = ">=3.7"
[package.dependencies]
packaging = "*"
[package.extras]
dev = ["pytest", "pytz", "simplejson", "mypy (==0.940)", "flake8 (==4.0.1)", "flake8-bugbear (==22.1.11)", "pre-commit (>=2.4,<3.0)", "tox"]
docs = ["sphinx (==4.4.0)", "sphinx-issues (==3.0.1)", "alabaster (==0.7.12)", "sphinx-version-warning (==1.1.2)", "autodocsumm (==0.2.7)"]
lint = ["mypy (==0.940)", "flake8 (==4.0.1)", "flake8-bugbear (==22.1.11)", "pre-commit (>=2.4,<3.0)"]
tests = ["pytest", "pytz", "simplejson"]
[[package]]
name = "marshmallow-dataclass"
version = "8.5.3"
description = "Python library to convert dataclasses into marshmallow schemas."
category = "main"
optional = false
python-versions = ">=3.6"
[package.dependencies]
marshmallow = ">=3.13.0,<4.0"
typing-inspect = ">=0.7.1"
[package.extras]
dev = ["marshmallow-enum", "typeguard", "pre-commit (>=1.18,<2.0)", "sphinx", "pytest (>=5.4)", "pytest-mypy-plugins (>=1.2.0)", "typing-extensions (>=3.7.2,<3.8.0)"]
docs = ["sphinx"]
enum = ["marshmallow-enum"]
lint = ["pre-commit (>=1.18,<2.0)"]
tests = ["pytest (>=5.4)", "pytest-mypy-plugins (>=1.2.0)", "typing-extensions (>=3.7.2,<3.8.0)"]
union = ["typeguard"]
[[package]]
name = "matplotlib"
version = "3.5.1"
@ -904,7 +952,7 @@ python2 = ["typed-ast (>=1.4.0,<1.5.0)"]
name = "mypy-extensions"
version = "0.4.3"
description = "Experimental type system extensions for programs checked with the mypy typechecker."
category = "dev"
category = "main"
optional = false
python-versions = "*"
@ -1248,28 +1296,32 @@ python-versions = ">=3.5"
[[package]]
name = "pylint"
version = "2.12.2"
version = "2.13.0"
description = "python code static checker"
category = "main"
optional = false
python-versions = ">=3.6.2"
[package.dependencies]
astroid = ">=2.9.0,<2.10"
astroid = ">=2.11.0,<=2.12.0-dev0"
colorama = {version = "*", markers = "sys_platform == \"win32\""}
dill = ">=0.2"
isort = ">=4.2.5,<6"
mccabe = ">=0.6,<0.7"
mccabe = ">=0.6,<0.8"
platformdirs = ">=2.2.0"
toml = ">=0.9.2"
tomli = {version = ">=1.1.0", markers = "python_version < \"3.11\""}
typing-extensions = {version = ">=3.10.0", markers = "python_version < \"3.10\""}
[package.extras]
testutil = ["gitpython (>3)"]
[[package]]
name = "pypandoc"
version = "1.7.2"
version = "1.7.4"
description = "Thin wrapper for pandoc."
category = "main"
optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*"
python-versions = "^2.7 || ^3.6"
[[package]]
name = "pyparsing"
@ -1360,7 +1412,7 @@ six = ">=1.5"
[[package]]
name = "pytz"
version = "2021.3"
version = "2022.1"
description = "World timezone definitions, modern and historical"
category = "main"
optional = false
@ -1658,7 +1710,7 @@ test = ["pytest"]
[[package]]
name = "types-requests"
version = "2.27.12"
version = "2.27.14"
description = "Typing stubs for requests"
category = "main"
optional = false
@ -1683,16 +1735,28 @@ category = "main"
optional = false
python-versions = ">=3.6"
[[package]]
name = "typing-inspect"
version = "0.7.1"
description = "Runtime inspection utilities for typing module."
category = "main"
optional = false
python-versions = "*"
[package.dependencies]
mypy-extensions = ">=0.3.0"
typing-extensions = ">=3.7.4"
[[package]]
name = "urllib3"
version = "1.26.8"
version = "1.26.9"
description = "HTTP library with thread-safe connection pooling, file post, and more."
category = "main"
optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, <4"
[package.extras]
brotli = ["brotlipy (>=0.6.0)"]
brotli = ["brotlicffi (>=0.8.0)", "brotli (>=1.0.9)", "brotlipy (>=0.6.0)"]
secure = ["pyOpenSSL (>=0.14)", "cryptography (>=1.3.4)", "idna (>=2.0.0)", "certifi", "ipaddress"]
socks = ["PySocks (>=1.5.6,!=1.5.7,<2.0)"]
@ -1709,7 +1773,7 @@ jellyfish = "0.6.1"
[[package]]
name = "virtualenv"
version = "20.13.3"
version = "20.13.4"
description = "Virtual Python Environment builder"
category = "dev"
optional = false
@ -1743,7 +1807,7 @@ python-versions = "*"
[[package]]
name = "widgetsnbextension"
version = "3.5.2"
version = "3.6.0"
description = "IPython HTML widgets for Jupyter"
category = "main"
optional = false
@ -1754,7 +1818,7 @@ notebook = ">=4.4.1"
[[package]]
name = "wrapt"
version = "1.13.3"
version = "1.14.0"
description = "Module for decorators, wrappers and monkey patching."
category = "main"
optional = false
@ -1783,7 +1847,7 @@ testing = ["pytest (>=6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest-
[metadata]
lock-version = "1.1"
python-versions = "^3.8"
content-hash = "48853003143c9035134427a9cb0e359401b1d49ffe55953a711a79d264994125"
content-hash = "4278ecd8aab0cf352d62961687c33f92cda5e6d246309b046484dd797edf4986"
[metadata.files]
appnope = [
@ -1818,8 +1882,8 @@ argon2-cffi-bindings = [
{file = "argon2_cffi_bindings-21.2.0-pp38-pypy38_pp73-win_amd64.whl", hash = "sha256:5e00316dabdaea0b2dd82d141cc66889ced0cdcbfa599e8b471cf22c620c329a"},
]
astroid = [
{file = "astroid-2.9.3-py3-none-any.whl", hash = "sha256:506daabe5edffb7e696ad82483ad0228245a9742ed7d2d8c9cdb31537decf9f6"},
{file = "astroid-2.9.3.tar.gz", hash = "sha256:1efdf4e867d4d8ba4a9f6cf9ce07cd182c4c41de77f23814feb27ca93ca9d877"},
{file = "astroid-2.11.1-py3-none-any.whl", hash = "sha256:e3ae0984c28b7bae2a107dffbc6e9acecf9b06506322f3465e914405dd652394"},
{file = "astroid-2.11.1.tar.gz", hash = "sha256:33f1c15fe9661348a50b7ec6789947089ead2a5de727bb4782d530d9d2fff2c8"},
]
atomicwrites = [
{file = "atomicwrites-1.4.0-py2.py3-none-any.whl", hash = "sha256:6d1784dea7c0c8d4a5172b6c620f40b6e4cbfdf96d783691f2e1302a7b88e197"},
@ -1933,27 +1997,24 @@ cycler = [
{file = "cycler-0.11.0.tar.gz", hash = "sha256:9c87405839a19696e837b3b818fed3f5f69f16f1eec1a1ad77e043dcea9c772f"},
]
debugpy = [
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{file = "debugpy-1.5.1-cp310-cp310-win32.whl", hash = "sha256:3a457ad9c0059a21a6c7d563c1f18e924f5cf90278c722bd50ede6f56b77c7fe"},
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{file = "debugpy-1.6.0.zip", hash = "sha256:7b79c40852991f7b6c3ea65845ed0f5f6b731c37f4f9ad9c61e2ab4bd48a9275"},
]
decorator = [
{file = "decorator-5.1.1-py3-none-any.whl", hash = "sha256:b8c3f85900b9dc423225913c5aace94729fe1fa9763b38939a95226f02d37186"},
@ -1963,6 +2024,10 @@ defusedxml = [
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